Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 2
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70932 | Soybean | cytosol, mitochondrion, nucleus, plastid | 65.62 | 77.78 |
| PGSC0003DMT400056345 | Potato | nucleus | 52.34 | 62.04 |
| Solyc01g010270.2.1 | Tomato | nucleus | 50.0 | 61.54 |
| Solyc05g012160.2.1 | Tomato | cytosol | 52.34 | 59.82 |
| PGSC0003DMT400072909 | Potato | cytosol | 52.34 | 59.82 |
| KXG23503 | Sorghum | nucleus | 45.31 | 58.0 |
| Os12t0502000-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 45.31 | 57.43 |
| CDY54148 | Canola | plastid | 46.09 | 53.15 |
| PGSC0003DMT400063325 | Potato | cytosol | 46.09 | 53.15 |
| KRH59959 | Soybean | nucleus | 35.94 | 52.87 |
| AT1G69230.1 | Thale cress | cytosol | 45.31 | 52.73 |
| Bra038321.1-P | Field mustard | plastid | 45.31 | 52.25 |
| KRH77582 | Soybean | nucleus | 39.06 | 52.08 |
| Solyc03g114970.2.1 | Tomato | nucleus | 44.53 | 51.35 |
| Os11t0629400-01 | Rice | extracellular | 46.09 | 51.3 |
| KRH41229 | Soybean | nucleus | 34.38 | 50.57 |
| CDY50305 | Canola | plastid | 46.09 | 49.17 |
| Zm00001d048795_P001 | Maize | mitochondrion | 42.97 | 48.67 |
| KRH18375 | Soybean | endoplasmic reticulum | 50.78 | 47.79 |
| EES10151 | Sorghum | mitochondrion | 43.75 | 46.28 |
| KRH27899 | Soybean | nucleus | 35.16 | 45.45 |
| KRG93666 | Soybean | extracellular | 46.88 | 38.46 |
| Zm00001d023735_P001 | Maize | cytosol, plasma membrane, plastid | 34.38 | 27.33 |
| VIT_17s0000g05160.t01 | Wine grape | cytosol | 39.06 | 25.91 |
Protein Annotations
| EMBL:ACUP02000112 | EnsemblPlants:KRH75073 | EnsemblPlantsGene:GLYMA_01G060900 | EntrezGene:100499684 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 |
| ProteinID:KRH75073 | ProteinID:KRH75073.1 | SEG:seg | UniParc:UPI00023BB5E1 | UniProt:A0A0R0L7F2 | MapMan:20.1.5.1.3 |
Description
hypothetical protein
Coordinates
chr1:+:8393362..8396017
Molecular Weight (calculated)
13032.2 Da
IEP (calculated)
9.896
GRAVY (calculated)
-0.596
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGVSSGGG QSSLGYLFGS GEAPAPKPAT NNAPAQPEVQ AVNNVPPPKA SPPTKTIDPN KAAGINSHST DGQNTGNFIT MKTHGDMNGF ILWRYKGLSL
101: DRPSTKVHAA PGGGSSLGYL FGEPGEGK
101: DRPSTKVHAA PGGGSSLGYL FGEPGEGK
001: MGRGVSVGGG QSSLGYLFGS GEAPKPAINN APAPSSETLP ISADPSPKHV AAQTVNVTKQ IPAGINKSST NNYIRADGQN TGNFLTDRPS TKVHAAPGGG
101: SSLDYLFGGG GSN
101: SSLDYLFGGG GSN
Arabidopsis Description
SP1L1Protein SPIRAL1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:B3H4F1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.