Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G02180.1 | Thale cress | cytosol | 54.95 | 40.98 |
| CDX90984 | Canola | cytosol | 48.35 | 40.37 |
| CDY26443 | Canola | cytosol | 47.25 | 36.75 |
| CDX91981 | Canola | nucleus | 54.95 | 34.48 |
| CDY54148 | Canola | plastid | 41.76 | 34.23 |
| CDY68263 | Canola | nucleus | 35.16 | 32.32 |
| CDY69243 | Canola | plastid | 38.46 | 32.11 |
| CDY50305 | Canola | plastid | 41.76 | 31.67 |
| CDY45707 | Canola | plastid | 38.46 | 31.53 |
| CDY65232 | Canola | nucleus | 34.07 | 31.31 |
| CDY63421 | Canola | nucleus | 34.07 | 31.31 |
| CDY02981 | Canola | cytosol, mitochondrion | 38.46 | 31.25 |
| CDX69512 | Canola | cytosol, plastid | 43.96 | 31.01 |
| CDY33112 | Canola | cytosol, mitochondrion | 38.46 | 30.7 |
| CDY04162 | Canola | cytosol | 38.46 | 28.93 |
| CDY51204 | Canola | plastid | 37.36 | 28.57 |
| CDX85544 | Canola | nucleus, plastid | 46.15 | 28.38 |
| CDX74269 | Canola | cytosol | 56.04 | 25.12 |
Protein Annotations
| EnsemblPlants:CDY34708 | EnsemblPlantsGene:GSBRNA2T00057227001 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 | ProteinID:CDY34708 | ProteinID:CDY34708.1 |
| SEG:seg | UniParc:UPI0004EDFA0D | UniProt:A0A078HD33 | MapMan:20.1.5.1.3 | : | : |
Description
BnaA01g33170DBnaA01g33170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD33]
Coordinates
chrLK032340:+:50716..51267
Molecular Weight (calculated)
9446.8 Da
IEP (calculated)
11.068
GRAVY (calculated)
-0.755
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MGTTTTTTTT TTTDGTGRRP ITTTTTTVTD NNNRLAAGVR GSPNNYFRSE GQNSGNFLTE RPSTKVRSAP GGVSSLGYLF GGPNAADSVK K
001: MGKARGVNNG VNESSLGYLF GSGQPSSAAA ATMGTTTTTT TTTTTDGTGG RPITTTTTTV TDNKKTSAGV RGSPNNYFRS EGQNCGNFLT DRPSTKVHAA
101: PGGGSSLDYL FGGPSPAGSG NK
101: PGGGSSLDYL FGGPSPAGSG NK
Arabidopsis Description
SP1L3Protein SPIRAL1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7P8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.