Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G02180.1 | Thale cress | cytosol | 68.97 | 81.97 |
| CDX74269 | Canola | cytosol | 95.86 | 68.47 |
| Bra001035.1-P | Field mustard | cytosol | 95.17 | 67.98 |
| CDX90984 | Canola | cytosol | 48.97 | 65.14 |
| CDX69512 | Canola | cytosol, plastid | 57.24 | 64.34 |
| CDY34708 | Canola | cytosol, plastid | 34.48 | 54.95 |
| CDY26443 | Canola | cytosol | 44.14 | 54.7 |
| CDY54148 | Canola | plastid | 40.0 | 52.25 |
| CDY50305 | Canola | plastid | 40.0 | 48.33 |
| CDY45707 | Canola | plastid | 36.55 | 47.75 |
| CDX85544 | Canola | nucleus, plastid | 48.28 | 47.3 |
| CDY69243 | Canola | plastid | 35.17 | 46.79 |
| CDY33112 | Canola | cytosol, mitochondrion | 35.86 | 45.61 |
| CDY02981 | Canola | cytosol, mitochondrion | 35.17 | 45.54 |
| CDY04162 | Canola | cytosol | 37.24 | 44.63 |
| CDY51204 | Canola | plastid | 35.86 | 43.7 |
| CDY65232 | Canola | nucleus | 29.66 | 43.43 |
| CDY68263 | Canola | nucleus | 29.66 | 43.43 |
| CDY63421 | Canola | nucleus | 27.59 | 40.4 |
Protein Annotations
| EnsemblPlants:CDX91981 | EnsemblPlantsGene:GSBRNA2T00153633001 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 | ProteinID:CDX91981 | ProteinID:CDX91981.1 |
| SEG:seg | UniParc:UPI0004EE8D27 | MapMan:20.1.5.1.3 | : | : | : |
Description
BnaC03g32830D
Coordinates
chrLK031870:+:1116073..1117166
Molecular Weight (calculated)
15095.4 Da
IEP (calculated)
10.627
GRAVY (calculated)
-0.710
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSPFAANHR RRHYELQKRS LSMGKARGVN NGVNQSSLDY LFGSGESPSA VAATMGTTTT TTTTTTTDGT GGRPVTTTTT TVTENKKIPA GVRGSPNNYF
101: RSEGQNCGNF LTERPSTKVH AAPGGGSSLG YLFGGPSSSA ESAKK
101: RSEGQNCGNF LTERPSTKVH AAPGGGSSLG YLFGGPSSSA ESAKK
001: MGKARGVNNG VNESSLGYLF GSGQPSSAAA ATMGTTTTTT TTTTTDGTGG RPITTTTTTV TDNKKTSAGV RGSPNNYFRS EGQNCGNFLT DRPSTKVHAA
101: PGGGSSLDYL FGGPSPAGSG NK
101: PGGGSSLDYL FGGPSPAGSG NK
Arabidopsis Description
SP1L3Protein SPIRAL1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7P8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.