Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G15660.1 | Thale cress | cytosol | 35.87 | 26.4 |
| AT2G40210.1 | Thale cress | nucleus | 48.91 | 24.26 |
| CDY01060 | Canola | nucleus | 39.67 | 21.16 |
| CDY08493 | Canola | nucleus | 40.22 | 21.08 |
| Bra034809.1-P | Field mustard | nucleus | 39.67 | 20.68 |
| AT5G06500.1 | Thale cress | nucleus | 19.02 | 14.46 |
| KRH68023 | Soybean | nucleus | 18.48 | 8.46 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817229 | UniProt:A0A178VRS6 | ProteinID:AAT69186.1 | ProteinID:AEC07903.1 | Symbol:AGL41 |
| ArrayExpress:AT2G26880 | EnsemblPlantsGene:AT2G26880 | RefSeq:AT2G26880 | TAIR:AT2G26880 | RefSeq:AT2G26880-TAIR-G | EnsemblPlants:AT2G26880.1 |
| TAIR:AT2G26880.1 | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | RefSeq:NP_180256.2 | ProteinID:OAP07552.1 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF184 | UniProt:Q6DR46 | UniParc:UPI000034EDA3 | : | : |
Description
AGL41AGL41 [Source:UniProtKB/TrEMBL;Acc:A0A178VRS6]
Coordinates
chr2:-:11459906..11461099
Molecular Weight (calculated)
21604.7 Da
IEP (calculated)
8.867
GRAVY (calculated)
-0.845
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIELFLNEK TNKVNEKLIK SCKKNKEYVS NELMMQLQRG RRIHDLNLSE IYTLLSYSRE TIMSFRKKFD FMQHSPLRDP PVLPFEVQVE QFKSTTKDAF
101: LGGDLDVERA RNTNEATRII NIDSLRENKS YYLIDQWFPT PEPPKPVTYQ QIGYETSNRR GYNPYQGSSS NGNPNFEMMS VSPK
101: LGGDLDVERA RNTNEATRII NIDSLRENKS YYLIDQWFPT PEPPKPVTYQ QIGYETSNRR GYNPYQGSSS NGNPNFEMMS VSPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.