Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037667.1-P | Field mustard | cytosol, peroxisome, plastid | 75.56 | 76.69 |
| Bra004803.1-P | Field mustard | plasma membrane | 61.48 | 76.15 |
| CDX79784 | Canola | plasma membrane | 61.48 | 76.15 |
| CDY23416 | Canola | cytosol, peroxisome, plasma membrane | 75.56 | 76.12 |
| CDY30454 | Canola | cytosol, peroxisome, plastid | 75.56 | 76.12 |
| CDY17888 | Canola | plasma membrane | 60.74 | 75.23 |
| Bra000340.1-P | Field mustard | cytosol, peroxisome, plasma membrane, plastid | 71.85 | 70.8 |
| CDX83441 | Canola | cytosol, peroxisome, plasma membrane | 71.11 | 70.07 |
| AT3G59900.1 | Thale cress | plastid | 63.7 | 66.15 |
| CDX95587 | Canola | cytosol | 71.11 | 51.61 |
Protein Annotations
| MapMan:35.1 | EntrezGene:819014 | UniProt:A0A178W0I4 | ProteinID:AAC23415.1 | ProteinID:AEC10371.1 | InterPro:ARGOS/ARL |
| Symbol:ARL | ArrayExpress:AT2G44080 | EnsemblPlantsGene:AT2G44080 | RefSeq:AT2G44080 | TAIR:AT2G44080 | RefSeq:AT2G44080-TAIR-G |
| EnsemblPlants:AT2G44080.1 | TAIR:AT2G44080.1 | EMBL:AY080817 | EMBL:BT000930 | EMBL:DQ369723 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009741 | GO:GO:0009825 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016049 | GO:GO:0035265 | GO:GO:0040007 | GO:GO:0046622 | RefSeq:NP_850409.1 |
| ProteinID:OAP11708.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001052 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025181 | PO:PO:0025281 | PANTHER:PTHR36023 | PANTHER:PTHR36023:SF3 |
| UniProt:Q8RXL7 | TMHMM:TMhelix | UniParc:UPI00000AC6A2 | SEG:seg | : | : |
Description
ARLARGOS-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q8RXL7]
Coordinates
chr2:+:18236789..18238173
Molecular Weight (calculated)
15000.6 Da
IEP (calculated)
10.312
GRAVY (calculated)
0.261
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MIREFSSLQN DIINIQEHYS LNNNMDVRGD HNRKNTSFRG SAPAPIMGKQ ELFRTLSSQN SPRRLISASY FSLESMVVLV GLTASLLILP LILPPLPPPP
101: FMLLLIPIGI MVLLMVLAFM PSSNSKHVSS SSTFM
101: FMLLLIPIGI MVLLMVLAFM PSSNSKHVSS SSTFM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.