Factsheet for AT3G04720.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 4
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001123.1-P	Field mustard	extracellular	84.43	83.64
CDX74169	Canola	extracellular	84.43	83.64
CDY40674	Canola	extracellular	83.96	83.18
KRG96979	Soybean	extracellular	64.62	64.93
KRG96980	Soybean	extracellular	57.55	62.89
Solyc01g097280.2.1	Tomato	extracellular	58.96	62.81
PGSC0003DMT400050016	Potato	extracellular	54.25	54.25
Solyc01g097270.2.1	Tomato	extracellular	53.77	53.77

Protein Annotations

Gene3D:2.40.40.10	Gene3D:3.30.60.10	MapMan:35.1	EntrezGene:819632	UniProt:A0A178VMU7	ProteinID:AAF04912.1
ProteinID:AEE74125.1	EMBL:AF370536	ArrayExpress:AT3G04720	EnsemblPlantsGene:AT3G04720	RefSeq:AT3G04720	TAIR:AT3G04720
RefSeq:AT3G04720-TAIR-G	EnsemblPlants:AT3G04720.1	TAIR:AT3G04720.1	EMBL:AY088644	EMBL:BT000046	InterPro:Barwin_CS
InterPro:Barwin_dom	InterPro:Chitin-bd_1	InterPro:Chitin-binding_1_CS	InterPro:Endochitinase-like_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0004518	GO:GO:0004540	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006139	GO:GO:0006950	GO:GO:0006952	GO:GO:0008061
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009615	GO:GO:0009627
GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009723	GO:GO:0009817	GO:GO:0009987
GO:GO:0016787	GO:GO:0031640	GO:GO:0042742	GO:GO:0050832	GO:GO:0080027	GO:GO:0090305
GO:GO:0090501	InterPro:IPR001002	InterPro:IPR001153	InterPro:IPR036861	InterPro:IPR036908	RefSeq:NP_187123.1
ProteinID:OAP06433.1	UniProt:P43082	PFAM:PD000609	PFAM:PD004535	PFAM:PF00187	PFAM:PF00967
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001185
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00451	PRINTS:PR00602	Symbol:PR4	ScanProsite:PS00026	ScanProsite:PS00771
ScanProsite:PS00772	PFscan:PS50941	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF71	InterPro:RlpA-like_sf
SMART:SM00270	SUPFAM:SSF50685	SUPFAM:SSF57016	SignalP:SignalP-noTM	EMBL:U01880	UniParc:UPI0000000ABB
SEG:seg	:	:	:	:	:

Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]

Coordinates

chr3:-:1285425..1286760

Molecular Weight (calculated)

22937.8 Da

IEP (calculated)

7.710

GRAVY (calculated)

-0.327

Length

212 amino acids

Sequence
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.