Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033151.1-P | Field mustard | cytosol | 62.81 | 79.44 |
| CDY63433 | Canola | cytosol | 78.43 | 77.93 |
| CDY25278 | Canola | cytosol, peroxisome, plasma membrane | 77.15 | 77.81 |
| AT1G64060.1 | Thale cress | cytosol | 57.49 | 57.31 |
| AT1G09090.2 | Thale cress | cytosol | 45.59 | 50.89 |
| AT5G47910.1 | Thale cress | cytosol, peroxisome, plasma membrane | 47.82 | 48.86 |
| AT5G51060.1 | Thale cress | cytosol | 46.97 | 48.84 |
| AT4G25090.1 | Thale cress | cytosol | 43.46 | 48.17 |
| AT5G07390.1 | Thale cress | cytosol | 45.91 | 47.89 |
| AT1G19230.2 | Thale cress | cytosol, peroxisome, plasma membrane | 45.59 | 45.06 |
| AT5G60010.1 | Thale cress | cytosol | 40.28 | 42.78 |
| AT3G45810.1 | Thale cress | cytosol | 39.74 | 41.01 |
| AT5G50160.1 | Thale cress | plasma membrane | 14.24 | 18.41 |
| AT5G23980.1 | Thale cress | plasma membrane | 13.6 | 18.31 |
| AT5G23990.2 | Thale cress | endoplasmic reticulum, plasma membrane | 13.5 | 18.17 |
| AT1G23020.2 | Thale cress | mitochondrion, plasma membrane | 12.86 | 16.88 |
| AT1G01590.1 | Thale cress | plasma membrane | 12.54 | 16.76 |
| AT5G49740.1 | Thale cress | plasma membrane | 12.86 | 16.2 |
| AT5G49730.1 | Thale cress | plasma membrane | 12.43 | 15.85 |
| AT1G01580.2 | Thale cress | plasma membrane | 13.18 | 15.44 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | EntrezGene:826725 | ProteinID:AEE82987.1 | ArrayExpress:AT4G11230 |
| EnsemblPlantsGene:AT4G11230 | RefSeq:AT4G11230 | TAIR:AT4G11230 | RefSeq:AT4G11230-TAIR-G | EnsemblPlants:AT4G11230.1 | TAIR:AT4G11230.1 |
| Unigene:At.33579 | ProteinID:CAB51407.1 | ProteinID:CAB81224.1 | ncoils:Coil | InterPro:Cyt_b245_heavy_chain | InterPro:EF-hand-dom_pair |
| InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0046872 | GO:GO:0050664 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR017927 | InterPro:NADPH_Ox |
| RefSeq:NP_192862.2 | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 | PFAM:PF08414 | PO:PO:0007611 |
| PO:PO:0009005 | PO:PO:0009046 | PRINTS:PR00466 | PFscan:PS51384 | PANTHER:PTHR11972 | PANTHER:PTHR11972:SF66 |
| UniProt:Q9SUT8 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix |
| UniParc:UPI000034F1E3 | SEG:seg | : | : | : | : |
Description
RBOHIProbable respiratory burst oxidase homolog protein I [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT8]
Coordinates
chr4:-:6840473..6845627
Molecular Weight (calculated)
106958.0 Da
IEP (calculated)
8.583
GRAVY (calculated)
-0.229
Length
941 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMSFSGGTH NDRWGSDLAS AGEFTQSFPS LPATYSPSPS SSSSSGEELL EVTIEFPSGV IINIDSVTGT GTDISGTDLE ITSCSDSGSG SRSLSLGWSA
101: SSERLTAGTN SKQQIQKISR RGYGYSSRSA PEPVVPHRGE ITDSVNLPRA LSQRPTRPNR DGSGTERAIH GLKFISSKEN GIVDWNDVQN NFAHLSKDGY
201: LFKSDFAHCI GLENENSKEF ADELFDALCR RRRIMVDKIN LQELYEFWYQ ITDESFDSRL QIFFNMVKNG DGRITENEVK EIIILSASAN NLSRLRERAE
301: EYAALIMEEL APDGLYSQYI ELKDLEILLL EKDISHSYSL PFSQTSRALS QNLKDRRWRM SRNLLYSLQD NWKRIWVLTL WFVIMAWLFM WKCYQYKHKD
401: AFHVMGYCLV MAKGAAETLK FNMALILLPV CRNTITYLRS TALSHSVPFD DCINFHKTIS VAIISAMLLH ATSHLACDFP RILASTDTDY KRYLVKYFGV
501: TRPTYFGLVN TPVGITGIIM VAFMLIAFTL ASRRCRRNLT KLPKPFDKLT GYNAFWYSHH LLLTVYVLLV IHGVSLYLEH KWYRKTVWMY LAVPVLLYVG
601: ERIFRFFRSR LYTVEICKVV IYPGNVVVLR MSKPTSFDYK SGQYVFVQCP SVSKFEWHPF SITSSPGDDY LSIHIRQRGD WTEGIKKAFS VVCHAPEAGK
701: SGLLRADVPN QRSFPELLID GPYGAPAQDH WKYDVVLLVG LGIGATPFVS ILRDLLNNII KQQEQAECIS GSCSNSNISS DHSFSCLNSE AASRIPQTQR
801: KTLNTKNAYF YWVTREQGSF DWFKEIMNEI ADSDRKGVIE MHNYLTSVYE EGDTRSNLLT MIQTLNHAKN GVDIFSGTKV RTHFGRPKWK KVLSKISTKH
901: RNARIGVFYC GVPSLGKELS TLCHEFNQTG ITRFDFHKEQ F
101: SSERLTAGTN SKQQIQKISR RGYGYSSRSA PEPVVPHRGE ITDSVNLPRA LSQRPTRPNR DGSGTERAIH GLKFISSKEN GIVDWNDVQN NFAHLSKDGY
201: LFKSDFAHCI GLENENSKEF ADELFDALCR RRRIMVDKIN LQELYEFWYQ ITDESFDSRL QIFFNMVKNG DGRITENEVK EIIILSASAN NLSRLRERAE
301: EYAALIMEEL APDGLYSQYI ELKDLEILLL EKDISHSYSL PFSQTSRALS QNLKDRRWRM SRNLLYSLQD NWKRIWVLTL WFVIMAWLFM WKCYQYKHKD
401: AFHVMGYCLV MAKGAAETLK FNMALILLPV CRNTITYLRS TALSHSVPFD DCINFHKTIS VAIISAMLLH ATSHLACDFP RILASTDTDY KRYLVKYFGV
501: TRPTYFGLVN TPVGITGIIM VAFMLIAFTL ASRRCRRNLT KLPKPFDKLT GYNAFWYSHH LLLTVYVLLV IHGVSLYLEH KWYRKTVWMY LAVPVLLYVG
601: ERIFRFFRSR LYTVEICKVV IYPGNVVVLR MSKPTSFDYK SGQYVFVQCP SVSKFEWHPF SITSSPGDDY LSIHIRQRGD WTEGIKKAFS VVCHAPEAGK
701: SGLLRADVPN QRSFPELLID GPYGAPAQDH WKYDVVLLVG LGIGATPFVS ILRDLLNNII KQQEQAECIS GSCSNSNISS DHSFSCLNSE AASRIPQTQR
801: KTLNTKNAYF YWVTREQGSF DWFKEIMNEI ADSDRKGVIE MHNYLTSVYE EGDTRSNLLT MIQTLNHAKN GVDIFSGTKV RTHFGRPKWK KVLSKISTKH
901: RNARIGVFYC GVPSLGKELS TLCHEFNQTG ITRFDFHKEQ F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.