Factsheet for AT1G19230.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	86.03	87.69
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	85.19	86.83
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	85.71	85.0
CDY41031	Canola	cytosol, peroxisome, plasma membrane	87.5	81.91
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	88.24	81.16
CDY26689	Canola	cytosol, peroxisome, plasma membrane	85.82	80.33
Solyc05g025680.1.1	Tomato	plasma membrane	44.96	68.59
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	64.71	67.18
Solyc07g042460.1.1	Tomato	cytosol	61.55	66.52
PGSC0003DMT400035268	Potato	mitochondrion	65.02	65.85
PGSC0003DMT400066027	Potato	peroxisome	30.88	64.19
KRH37549	Soybean	cytosol	61.55	63.15
KRH12608	Soybean	cytosol	61.76	62.82
GSMUA_Achr8P23680_001	Banana	mitochondrion	57.14	61.05
GSMUA_Achr3P05840_001	Banana	mitochondrion	56.83	60.79
Zm00001d032079_P001	Maize	mitochondrion	59.14	57.68
TraesCS5B01G212100.1	Wheat	mitochondrion	59.45	57.46
HORVU5Hr1G062490.8	Barley	plasma membrane	59.24	57.14
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	59.35	57.13
TraesCS5D01G222100.1	Wheat	mitochondrion	59.45	56.94
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	56.62	56.74
TraesCS6A01G180600.1	Wheat	mitochondrion	56.93	56.69
KXG35704	Sorghum	mitochondrion	59.87	56.6
TraesCS6B01G205000.1	Wheat	mitochondrion	56.72	56.43
KXG25273	Sorghum	mitochondrion	59.56	56.25
Os09t0438000-01	Rice	mitochondrion	59.45	56.21
HORVU6Hr1G035970.2	Barley	mitochondrion	54.62	54.22
AT1G64060.1	Thale cress	cytosol	51.89	52.33
AT1G09090.2	Thale cress	cytosol	44.33	50.06
Zm00001d020609_P001	Maize	mitochondrion	35.92	48.24
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	46.01	47.56
Solyc05g025690.1.1	Tomato	mitochondrion	11.97	47.11
AT4G25090.1	Thale cress	cytosol	41.07	46.05
AT5G51060.1	Thale cress	cytosol	43.7	45.97
AT5G07390.1	Thale cress	cytosol	43.28	45.68
AT4G11230.1	Thale cress	cytosol	45.06	45.59
Os08t0453700-00	Rice	plastid	44.96	45.05
AT5G60010.1	Thale cress	cytosol	39.81	42.78
AT3G45810.1	Thale cress	cytosol	39.39	41.12
AT5G23990.2	Thale cress	endoplasmic reticulum, plasma membrane	15.44	21.03
AT5G23980.1	Thale cress	plasma membrane	15.13	20.6
AT5G50160.1	Thale cress	plasma membrane	15.13	19.78
AT1G23020.2	Thale cress	mitochondrion, plasma membrane	14.08	18.69
AT1G01590.1	Thale cress	plasma membrane	13.55	18.32
AT5G49740.1	Thale cress	plasma membrane	13.97	17.8
AT5G49730.1	Thale cress	plasma membrane	13.45	17.34
AT1G01580.2	Thale cress	plasma membrane	13.97	16.56

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EntrezGene:838506	ProteinID:AAC39478.1
ProteinID:AAF82233.1	ProteinID:AEE29820.1	ProteinID:AEE29821.2	ArrayExpress:AT1G19230	EnsemblPlantsGene:AT1G19230	RefSeq:AT1G19230
TAIR:AT1G19230	RefSeq:AT1G19230-TAIR-G	EnsemblPlants:AT1G19230.2	TAIR:AT1G19230.2	Unigene:At.71091	ncoils:Coil
InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	RefSeq:NP_001319042.1	RefSeq:NP_173357.1	UniProt:O81211
PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PO:PO:0000230	PO:PO:0007611
PO:PO:0009005	PO:PO:0009029	PO:PO:0009031	PO:PO:0009046	PO:PO:0020100	PO:PO:0025022
PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF44
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI00022E9045
SEG:seg	:	:	:	:	:

Description

RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]

Coordinates

chr1:+:6643942..6649149

Molecular Weight (calculated)

107709.0 Da

IEP (calculated)

8.901

GRAVY (calculated)

-0.207

Length

952 amino acids

Sequence
(BLAST)

001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.