Factsheet for GSMUA_Achr3P05840_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P23680_001	Banana	mitochondrion	89.89	89.79
TraesCS5B01G212100.1	Wheat	mitochondrion	78.2	70.66
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	77.87	70.07
Os09t0438000-01	Rice	mitochondrion	79.21	70.01
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	74.72	70.0
TraesCS5D01G222100.1	Wheat	mitochondrion	78.09	69.92
TraesCS6B01G205000.1	Wheat	mitochondrion	75.17	69.91
TraesCS6A01G180600.1	Wheat	mitochondrion	75.06	69.87
KXG35704	Sorghum	mitochondrion	78.88	69.71
HORVU5Hr1G062490.8	Barley	plasma membrane	77.3	69.71
Zm00001d032079_P001	Maize	mitochondrion	76.18	69.47
KXG25273	Sorghum	mitochondrion	78.09	68.95
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	69.21	67.18
HORVU6Hr1G035970.2	Barley	mitochondrion	71.91	66.74
Solyc05g025680.1.1	Tomato	plasma membrane	46.74	66.67
Solyc07g042460.1.1	Tomato	cytosol	62.7	63.34
PGSC0003DMT400035268	Potato	mitochondrion	66.63	63.09
KRH37549	Soybean	cytosol	64.72	62.07
KRH12608	Soybean	cytosol	64.72	61.54
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	20.22	61.02
PGSC0003DMT400066027	Potato	peroxisome	31.35	60.92
Zm00001d020609_P001	Maize	mitochondrion	47.08	59.1
GSMUA_Achr10P...	Banana	plasma membrane	34.16	58.35
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	60.9	58.03
GSMUA_Achr9P05450_001	Banana	mitochondrion	56.63	57.86
GSMUA_Achr6P11760_001	Banana	golgi	26.4	57.6
Os08t0453700-00	Rice	plastid	61.24	57.37
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	60.0	57.17
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	60.79	56.83
GSMUA_Achr5P29250_001	Banana	cytosol	45.84	56.51
GSMUA_Achr6P31850_001	Banana	mitochondrion	56.4	56.28
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	60.45	56.04
GSMUA_AchrUn_...	Banana	cytosol	13.93	54.39
CDY41031	Canola	cytosol, peroxisome, plasma membrane	61.12	53.49
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	33.03	52.88
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	61.46	52.85
GSMUA_AchrUn_...	Banana	cytosol	25.62	52.05
CDY26689	Canola	cytosol, peroxisome, plasma membrane	59.33	51.92
GSMUA_Achr6P16270_001	Banana	cytosol	49.55	51.22
GSMUA_Achr10P...	Banana	cytosol	48.09	50.71
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	47.42	50.6
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	46.74	49.88
GSMUA_Achr10P...	Banana	cytosol	50.22	48.64
GSMUA_Achr11P...	Banana	mitochondrion	27.19	46.18
GSMUA_Achr6P11770_001	Banana	cytosol	20.34	45.02
GSMUA_Achr10P...	Banana	nucleus, plastid	13.82	44.09
Solyc05g025690.1.1	Tomato	mitochondrion	11.57	42.56
GSMUA_Achr8P12260_001	Banana	peroxisome	11.01	19.6
GSMUA_Achr8P12250_001	Banana	plasma membrane	15.51	19.49
GSMUA_Achr11P...	Banana	plasma membrane	15.39	18.74
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	14.27	16.39
GSMUA_Achr8P12270_001	Banana	plasma membrane	15.51	15.16
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	3.26	12.72

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom
InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr3G05840_001	EnsemblPlants:GSMUA_Achr3P05840_001	EnsemblPlants:GSMUA_Achr3T05840_001	InterPro:IPR002048	InterPro:IPR017927
UniProt:M0SC52	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF80	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002964A8D	SEG:seg

Description

Respiratory burst oxidase homolog protein E [Source:GMGC_GENE;Acc:GSMUA_Achr3G05840_001]

Coordinates

chr3:+:3937188..3946199

Molecular Weight (calculated)

100272.0 Da

IEP (calculated)

9.177

GRAVY (calculated)

-0.182

Length

890 amino acids

Sequence
(BLAST)

001: MVRTPSSGGG SSRKSGHRRI ADILADDEDS SDESVFNGYG YGYGGGGGGM LPIFLNDQSD LVEVMLELDE ESMVVRSVTP TSAAAAAAAS AGRDSSGSLS
101: QSSSTASRIR RKFAWLRSPT RTTTGAADAA ELWRRVEDRF ALLAKDGLLS REDFGECIGM VDSKEFAVGI FDALSRRRRQ NLERITKEEL YEFWLQISDQ
201: SFDARLQIFF DMADTNVDGR ITREEVQELI GLSASANKLS MLKEQADEYA ALIMEELDPE NLGYIELWQL EALLLQRDTY MNYSRPLSTA SAAGWSQTIA
301: GGPKPSRRRW FSPRRAAARL RLAAQENWQR AWVVSLWLAA MAGLFAWKFT QYRERDAFQV MGYCLPTAKG AAETLKLNMA LVLLPVCRNT LTWLRSTRAR
401: LFVPFDDNIT FHKMIATAIV IGILLHAGNH LTCDFPRLIN SSPARYELVA RYFGQEKPTY GSLVAGVEGV TGIAMVVLMT ISFTLATHRF RKNGARLPFP
501: LNRLSGFNAF WYSHHLLAVV YVLLLVHGYY MFLVQEWYQR TTWMYISVPL LLYVGERNLR AFRSKAYSVK ILKVALLPGG VLTVTMSKPH GFRYRSGQYI
601: FLQCPTISPF EWHPFSITSA PGDEYLSVHI RTSGDWTQEL KRIFIESYFS PHSMGRASLN ESGSSEQTRQ PRLFVDGPYG APAQDFRNYD VLLLVGLGIG
701: ATPFISILRD LLNNIKLADE LMDLAMETSR SEVSSHSFSF STSSSSIKKR TYRTSSAHFY WVTREAGSFE WFKGVMNDVA EMDKKGIIEM HNYLTSVYEE
801: RDARTTLLTM VQALSHAKHG VDIVSGTRVR THFARPNWKE VFTKLASEHP GATVGVFYCG TPTLAKELRK LSLETSHKTS TRFHFHKEYF

Best Arabidopsis Sequence Match ( AT1G19230.2 )
(BLAST)

001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF

Arabidopsis Description

RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.