Factsheet for GSMUA_AchrUn_randomP01590_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	75.88	58.64
CDX86059	Canola	peroxisome, plasma membrane, plastid	60.53	35.29
GSMUA_Achr6P11760_001	Banana	golgi	52.63	29.41
GSMUA_Achr10P...	Banana	plasma membrane	53.51	23.42
GSMUA_Achr5P29250_001	Banana	cytosol	73.68	23.27
KXG32613	Sorghum	cytosol, plastid	75.44	20.8
Os05t0465800-01	Rice	plasma membrane	74.56	20.76
Zm00001d009349_P004	Maize	plastid	74.56	20.68
Os01t0835500-01	Rice	cytosol	75.88	20.52
GSMUA_Achr10P...	Banana	cytosol	75.88	20.5
TraesCS1A01G290700.2	Wheat	mitochondrion	70.61	20.12
OQU87817	Sorghum	cytosol	75.0	20.02
TraesCS3B01G386600.1	Wheat	cytosol	74.56	20.0
TraesCS1D01G289300.2	Wheat	mitochondrion	70.18	20.0
TraesCS3D01G347900.2	Wheat	cytosol	74.12	19.95
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	73.25	19.83
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	48.25	19.78
TraesCS3A01G354200.2	Wheat	cytosol	73.68	19.74
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	74.56	19.63
Zm00001d042961_P002	Maize	plasma membrane	74.12	19.14
TraesCS1B01G300000.2	Wheat	mitochondrion	70.61	18.09
PGSC0003DMT400040179	Potato	cytosol	60.53	17.78
Solyc06g075570.1.1	Tomato	cytosol	63.6	17.47
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	63.6	17.39
Solyc11g072800.1.1	Tomato	cytosol	60.53	16.91
CDX99140	Canola	cytosol, peroxisome, plasma membrane	61.4	16.59
VIT_06s0004g03790.t01	Wine grape	nucleus	60.53	16.2
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	71.49	16.12
Bra038274.1-P	Field mustard	cytosol	61.4	16.02
KRH49079	Soybean	cytosol	58.33	15.48
CDY09233	Canola	cytosol	59.21	15.27
Bra020270.1-P	Field mustard	cytosol	59.21	15.27
GSMUA_Achr9P05450_001	Banana	mitochondrion	58.33	15.27
AT5G60010.1	Thale cress	cytosol	59.21	15.24
AT3G45810.1	Thale cress	cytosol	60.09	15.02
GSMUA_Achr6P31850_001	Banana	mitochondrion	57.02	14.57
GSMUA_Achr6P16270_001	Banana	cytosol	53.51	14.17
GSMUA_Achr8P23680_001	Banana	mitochondrion	54.82	14.03
GSMUA_Achr3P05840_001	Banana	mitochondrion	54.39	13.93
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	49.12	13.43
GSMUA_Achr10P...	Banana	cytosol	53.95	13.38
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	47.37	12.95
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	10.09	10.09
GSMUA_Achr8P12260_001	Banana	peroxisome	18.86	8.6
GSMUA_Achr8P12250_001	Banana	plasma membrane	19.3	6.21
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	17.54	5.16
GSMUA_Achr11P...	Banana	plasma membrane	16.23	5.06
GSMUA_Achr8P12270_001	Banana	plasma membrane	19.74	4.95
GSMUA_Achr10P...	Banana	nucleus, plastid	3.95	3.23
GSMUA_Achr11P...	Banana	mitochondrion	2.63	1.15
GSMUA_Achr6P11770_001	Banana	cytosol	1.75	1.0
GSMUA_AchrUn_...	Banana	cytosol	0.44	0.23

Protein Annotations

Gene3D:3.40.50.80	MapMan:35.1	ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG01590_001	EnsemblPlants:GSMUA_AchrUn_randomP01590_001	EnsemblPlants:GSMUA_AchrUn_randomT01590_001	UniProt:M0U5H1
PFAM:PF08030	PRINTS:PR00466	PANTHER:PTHR11972	PANTHER:PTHR11972:SF54	SUPFAM:SSF52343	TMHMM:TMhelix
UniParc:UPI000296DFEE	SEG:seg	:	:	:	:

Description

Respiratory burst oxidase homolog protein A [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01590_001]

Coordinates

chrchrUn_random:+:6253590..6254731

Molecular Weight (calculated)

25949.5 Da

IEP (calculated)

4.958

GRAVY (calculated)

-0.475

Length

228 amino acids

Sequence
(BLAST)

001: MIYEHSSKQA CEAQVKSKKA NLVRLETTVI ADLFIDGPYG APAQDYKKYD ILLLIGLGIG ATPFISILRD LLNNTQLMQE MQNEDEPDSE NKGNGPGRAY
101: FYWVTREQGS FEWFKSVMDE VAESDHNNVI EMHDYLTSVY EEGDVQSTLM PMVQSLQHAK SGLDIVSGRH FARPNWRKVF SDLASAHKAS QIGVFYCGSA
201: KLTQQLWNLS QEFSNDTTTR FDFHKENF

Best Arabidopsis Sequence Match ( AT1G64060.1 )
(BLAST)

001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF

Arabidopsis Description

RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.