Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G347900.2 | Wheat | cytosol | 98.82 | 99.29 |
TraesCS3B01G386600.1 | Wheat | cytosol | 98.94 | 99.06 |
HORVU3Hr1G087210.4 | Barley | peroxisome, plastid | 97.18 | 95.5 |
Os01t0835500-01 | Rice | cytosol | 88.13 | 88.97 |
OQU87817 | Sorghum | cytosol | 87.66 | 87.35 |
Zm00001d042961_P002 | Maize | plasma membrane | 87.07 | 83.92 |
TraesCS1A01G290700.2 | Wheat | mitochondrion | 69.8 | 74.25 |
GSMUA_AchrUn_... | Banana | cytosol | 19.74 | 73.68 |
GSMUA_AchrUn_... | Banana | cytosol | 36.19 | 70.32 |
PGSC0003DMT400040179 | Potato | cytosol | 57.11 | 62.63 |
Solyc06g075570.1.1 | Tomato | cytosol | 60.16 | 61.69 |
PGSC0003DMT400078138 | Potato | cytosol, nucleus, plastid | 60.16 | 61.39 |
VIT_06s0004g03790.t01 | Wine grape | nucleus | 61.46 | 61.38 |
CDX86059 | Canola | peroxisome, plasma membrane, plastid | 27.38 | 59.59 |
Solyc11g072800.1.1 | Tomato | cytosol | 57.11 | 59.56 |
KRH49079 | Soybean | cytosol | 58.64 | 58.09 |
CDY09233 | Canola | cytosol | 56.87 | 54.75 |
Bra020270.1-P | Field mustard | cytosol | 56.87 | 54.75 |
AT5G60010.1 | Thale cress | cytosol | 56.99 | 54.74 |
Bra038274.1-P | Field mustard | cytosol | 54.41 | 52.97 |
AT3G45810.1 | Thale cress | cytosol | 56.17 | 52.41 |
TraesCS5A01G527600.1 | Wheat | cytosol | 48.06 | 48.29 |
CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 46.53 | 46.92 |
TraesCS5A01G499900.1 | Wheat | cytosol | 50.53 | 46.79 |
TraesCS3A01G182900.1 | Wheat | cytosol | 48.77 | 46.06 |
TraesCS5A01G301700.1 | Wheat | cytosol | 49.59 | 45.87 |
TraesCS5A01G093600.1 | Wheat | cytosol | 47.24 | 45.84 |
TraesCS1A01G347700.1 | Wheat | mitochondrion | 51.7 | 45.79 |
TraesCS3A01G280200.1 | Wheat | mitochondrion | 52.41 | 45.7 |
TraesCS6A01G180600.1 | Wheat | mitochondrion | 49.47 | 44.04 |
TraesCS5A01G211800.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 50.53 | 43.48 |
TraesCS1A01G285700.1 | Wheat | cytosol | 45.71 | 41.65 |
TraesCS1A01G284600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 37.84 | 40.66 |
TraesCS1A01G357100.1 | Wheat | cytosol | 30.43 | 39.78 |
TraesCS2A01G396000.1 | Wheat | plasma membrane | 15.28 | 16.75 |
TraesCS2A01G312600.1 | Wheat | plasma membrane | 14.69 | 16.71 |
Protein Annotations
Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | InterPro:Cyt_b245_heavy_chain | InterPro:EF-hand-dom_pair |
InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0050664 | GO:GO:0055114 |
InterPro:IPR002048 | InterPro:IPR017927 | InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 |
PFAM:PF08414 | PRINTS:PR00466 | ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 | PANTHER:PTHR11972 |
PANTHER:PTHR11972:SF68 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix |
EnsemblPlantsGene:TraesCS3A01G354200 | EnsemblPlants:TraesCS3A01G354200.2 | TIGR:cd06186 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3A:-:601556594..601560796
Molecular Weight (calculated)
95754.2 Da
IEP (calculated)
9.853
GRAVY (calculated)
-0.153
Length
851 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPGGGYAD RPAPPLDGMI TVDGGGGRTP PPAGLPRPPG FRGLMQQPSR LASGVRQFAS RVSMKVPEVV PGIRPGGGRM TRMQSSAQMG LKGLRFLDKT
101: SGSKEGWKAV ERRFDEMSKA SGRLPKESFG KCIGMGDSKE FAGELFVTLS RRRSIEPEQG ITKEQLREFW TEMTDQNFDS RLRIFFDMCD KNGDGMLTED
201: EVKEVIILSA SANKLAKLKS HAATYSSLIM EELDPDDRGY IEIWQLETLL RGMVSAQAPE VKLKRTTSSL ARTMIPMRYR SPLKRHVTRT MDFVHENWKR
301: IWLVTLWLAA NLALFVYKFE QYKHRSSFQV MGNCVCVAKG AAETLKLNMA LILLPVCRNT LTTLRSTALS HVIPFDDNIN FHKVLAGAIA VGTVVHTLAH
401: VTCDFPRLVS CPSDKFMALL GPNFGFRQPT YPDLLASAPG VTGILMIIIM TFSFTLAMHT FRRSVVKLPS PLHHLAGFNA FWYAHHLLLL VYVLLVVHSY
501: FIFLTRVWYK KTTWMFLIVP VLFYACERII RKVRENNYHV NILKAAIYPG NVLSLHMKKP PGFKYKSGMY LFVKCPDVSP FEWHPFSITS APGDDYLSVH
601: IRTLGDWTSE LRNLFGKCFE AQVTSKKATL SRLETTVVAD SATEDTRFPK VFIDGPYGAP AQNYKKYDIL LLIGLGIGAT PFISILKDLL NNIKSNDEVE
701: SIHGSEIGSF KNSGPGRAYF YWVTREQGSF DWFKGVMNEV ADNDHSDVIE MHNYLTSVYE EGDARSALIA MVQSLQHAKN GVDIVSGSKI RTHFARPNWR
801: KVFSDLANAH KNSRIGVFYC GSPTLTKQLK DLSKEFSQTT TTRFHFHKEN F
101: SGSKEGWKAV ERRFDEMSKA SGRLPKESFG KCIGMGDSKE FAGELFVTLS RRRSIEPEQG ITKEQLREFW TEMTDQNFDS RLRIFFDMCD KNGDGMLTED
201: EVKEVIILSA SANKLAKLKS HAATYSSLIM EELDPDDRGY IEIWQLETLL RGMVSAQAPE VKLKRTTSSL ARTMIPMRYR SPLKRHVTRT MDFVHENWKR
301: IWLVTLWLAA NLALFVYKFE QYKHRSSFQV MGNCVCVAKG AAETLKLNMA LILLPVCRNT LTTLRSTALS HVIPFDDNIN FHKVLAGAIA VGTVVHTLAH
401: VTCDFPRLVS CPSDKFMALL GPNFGFRQPT YPDLLASAPG VTGILMIIIM TFSFTLAMHT FRRSVVKLPS PLHHLAGFNA FWYAHHLLLL VYVLLVVHSY
501: FIFLTRVWYK KTTWMFLIVP VLFYACERII RKVRENNYHV NILKAAIYPG NVLSLHMKKP PGFKYKSGMY LFVKCPDVSP FEWHPFSITS APGDDYLSVH
601: IRTLGDWTSE LRNLFGKCFE AQVTSKKATL SRLETTVVAD SATEDTRFPK VFIDGPYGAP AQNYKKYDIL LLIGLGIGAT PFISILKDLL NNIKSNDEVE
701: SIHGSEIGSF KNSGPGRAYF YWVTREQGSF DWFKGVMNEV ADNDHSDVIE MHNYLTSVYE EGDARSALIA MVQSLQHAKN GVDIVSGSKI RTHFARPNWR
801: KVFSDLANAH KNSRIGVFYC GSPTLTKQLK DLSKEFSQTT TTRFHFHKEN F
001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF
Arabidopsis Description
RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.