Factsheet for Solyc11g072800.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040179	Potato	cytosol	91.91	96.65
Solyc06g075570.1.1	Tomato	cytosol	74.75	73.49
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	25.25	69.83
GSMUA_Achr5P29250_001	Banana	cytosol	57.11	64.54
VIT_06s0004g03790.t01	Wine grape	nucleus	66.54	63.73
CDX86059	Canola	peroxisome, plasma membrane, plastid	29.41	61.38
GSMUA_AchrUn_...	Banana	cytosol	16.91	60.53
KRH49079	Soybean	cytosol	63.11	59.95
GSMUA_AchrUn_...	Banana	cytosol	31.74	59.13
TraesCS1D01G289300.2	Wheat	mitochondrion	57.72	58.88
TraesCS1A01G290700.2	Wheat	mitochondrion	57.48	58.62
Os01t0835500-01	Rice	cytosol	60.05	58.13
Zm00001d009349_P004	Maize	plastid	58.46	58.03
Os05t0465800-01	Rice	plasma membrane	58.21	58.0
GSMUA_Achr11P...	Banana	mitochondrion	37.01	57.63
TraesCS3D01G347900.2	Wheat	cytosol	59.8	57.62
GSMUA_Achr10P...	Banana	cytosol	59.31	57.35
TraesCS3B01G386600.1	Wheat	cytosol	59.68	57.29
OQU87817	Sorghum	cytosol	59.8	57.14
TraesCS3A01G354200.2	Wheat	cytosol	59.56	57.11
KXG32613	Sorghum	cytosol, plastid	57.84	57.07
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	58.09	56.29
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	59.44	56.0
Zm00001d042961_P002	Maize	plasma membrane	59.8	55.27
AT5G60010.1	Thale cress	cytosol	58.58	53.95
Bra020270.1-P	Field mustard	cytosol	58.21	53.73
CDY09233	Canola	cytosol	58.21	53.73
TraesCS1B01G300000.2	Wheat	mitochondrion	58.21	53.37
Bra038274.1-P	Field mustard	cytosol	55.39	51.72
AT3G45810.1	Thale cress	cytosol	56.99	50.99
Solyc05g025680.1.1	Tomato	plasma membrane	36.76	48.08
CDX99140	Canola	cytosol, peroxisome, plasma membrane	49.26	47.63
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	58.33	47.08
Solyc06g068680.2.1	Tomato	cytosol	47.43	45.16
Solyc01g099620.2.1	Tomato	cytosol	47.43	44.74
Solyc07g042460.1.1	Tomato	cytosol	47.18	43.7
Solyc08g081690.2.1	Tomato	cytosol	49.75	42.16
Solyc03g117980.2.1	Tomato	nucleus	48.04	41.79
Solyc05g025690.1.1	Tomato	mitochondrion	7.23	24.38
Solyc03g112320.2.1	Tomato	plasma membrane	13.11	19.28
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	4.41	18.46
Solyc01g102610.2.1	Tomato	plastid	15.44	17.03
Solyc01g094890.2.1	Tomato	plasma membrane	14.71	16.83
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	14.09	15.99
Solyc06g036220.1.1	Tomato	plasma membrane	7.48	14.52

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	UniProt:K4DAY7
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466
ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF54	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	EnsemblPlantsGene:Solyc11g072800.1	EnsemblPlants:Solyc11g072800.1.1	TMHMM:TMhelix
UniParc:UPI0002769E48	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:-:55996787..56001138

Molecular Weight (calculated)

93675.5 Da

IEP (calculated)

9.172

GRAVY (calculated)

-0.179

Length

816 amino acids

Sequence
(BLAST)

001: MGETPIENGG GGRTKMVRIE SGAARGFKSL HFLDNTTGKE ADAWKNVEKR FHINAVNGIL FKDKFGPSIG MKSFFFKKNK IGARGKKGFL STELLNLCDI
101: VFLFFSEMKG MESKEFAEEL FDTMARRKKI NAENGITIEE LKEFWDDIST HCPDTRLHIF FDMCDKNGDG KLSEEEVKEV LVMSASANKL TNFKKHAATY
201: AALIMEEFDP DHLGYIEIWQ LESLLRGMVG SEDGQNNMKR SQTLAKTMIP RQYRTPVSKF LSKTSEKIYD NWKRIWVVTL WLSINFILFI WKIEQFKRRE
301: AFKIMGYCVC LAKAAGETLK FNMALILIPV CRRTLTQIRE SFLGYIIPFD DNINFHKMVA VGITVGAFIH ILFHTSCNFV KLASCPESKF MTALGSNFGY
401: QQPTYMDLVV SVPGVTGILM TLFMLFSFTL ATHSFRRNII KLPGSFHHLA GFNAFWYAHH LLIFVYVLLI LHGCFIFLTN EWYKKTTWMY LAVPVVLYST
501: ERVLIINENR YHVNIQKAVI YAGNVLALYM TKPPGFKYKS GMYLFVKCPD ISNFEWHPFS ITSAPDEDYL SVHIRTLGDW TTELRTRFEK ACQEAPSKTR
601: NLVRMETKAY NQKDAEQSQA ENPMIIIKGP YGAPAQNYKK YDILLLVGLG IGATPFISII KDILNQKSGY NQQDDGKKGP QRAYFYWVTR EQGSFDWFKG
701: VMDDIAEHDE NEVIEMHNYL TSVYEEGDAR SALITMVQSL QHAKNGVDVV SESRIRTHFS RPNWKRVFAQ LAVTHPSSRI GVFYCGSPTL TKPLKKLCQE
801: FSLNSSTRFN FHKENF

Best Arabidopsis Sequence Match ( AT5G60010.1 )
(BLAST)

001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

Arabidopsis Description

RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.