CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009349_P004	Maize	plastid	93.71	94.28
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	93.47	91.81
Os05t0465800-01	Rice	plasma membrane	83.68	84.49
TraesCS1A01G290700.2	Wheat	mitochondrion	79.44	82.12
TraesCS1D01G289300.2	Wheat	mitochondrion	79.2	81.88
OQU87817	Sorghum	cytosol	78.72	76.23
GSMUA_AchrUn_...	Banana	cytosol	20.8	75.44
TraesCS1B01G300000.2	Wheat	mitochondrion	80.65	74.94
GSMUA_AchrUn_...	Banana	cytosol	36.52	68.95
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	81.14	66.37
PGSC0003DMT400040179	Potato	cytosol	57.07	60.82
CDX86059	Canola	peroxisome, plasma membrane, plastid	28.66	60.61
Solyc06g075570.1.1	Tomato	cytosol	60.58	60.36
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	60.1	59.59
VIT_06s0004g03790.t01	Wine grape	nucleus	61.19	59.39
Solyc11g072800.1.1	Tomato	cytosol	57.07	57.84
KRH49079	Soybean	cytosol	59.25	57.04
AT5G60010.1	Thale cress	cytosol	58.04	54.18
CDY09233	Canola	cytosol	57.68	53.96
Bra020270.1-P	Field mustard	cytosol	57.68	53.96
Bra038274.1-P	Field mustard	cytosol	54.29	51.37
AT3G45810.1	Thale cress	cytosol	55.62	50.44
CDX99140	Canola	cytosol, peroxisome, plasma membrane	47.76	46.8
EES01429	Sorghum	mitochondrion	53.33	46.72
KXG22389	Sorghum	mitochondrion	53.45	46.19
OQU86843	Sorghum	cytosol	51.03	45.67
EES16102	Sorghum	plastid	48.49	43.78
KXG25273	Sorghum	mitochondrion	50.91	41.77
KXG35704	Sorghum	mitochondrion	50.67	41.61
OQU83587	Sorghum	plastid	51.15	39.2
OQU92169	Sorghum	peroxisome, plastid	37.97	37.51
EES10867	Sorghum	plasma membrane	14.51	15.67

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A1B6Q3Y4	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927
EnsemblPlants:KXG32613	ProteinID:KXG32613	ProteinID:KXG32613.1	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PFAM:PF13405	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222
PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF68	InterPro:Riboflavin_synthase-like_b-brl	EnsemblPlantsGene:SORBI_3003G175000	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI00081AD3FA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:42472858..42477653

Molecular Weight (calculated)

93658.3 Da

IEP (calculated)

9.759

GRAVY (calculated)

-0.191

Length

827 amino acids

Sequence
(BLAST)

001: MASSAGYAGG DTGGLGDGEP PPPVPPQMRK QPSRIASGMR RLASKVSSAV PEMRGHKHTH SGAQSGLRGL RFLDKTSAGK DGWKTVEKRF DEMSTDGRLQ
101: RENFAKCIGM ADSKEFASEV FVALSRRRHI NPDDGVTKEQ LKEFWEEMTD QNFDSRLRIF FDMCDKNGDG KLTEDEVKEI MVLSASANKL AKLKKHAGTY
201: ASLIMEELDP DHRGYIEIWQ LETLLRGMVS ASGPPDKMNM ASQSLTRTMV PSSHRSPLQR RMNMAVDFVH ENWKRIWVIS LWGALNIALF VFKFIQYRRR
301: AVFEVMGYCV CIAKGAAETL KLNMALILLP VCRNTLTRLR STALSKVVPF DDNINFHKVI ALTIAIGAAT HTLSHVLCDF PRLVSCPKDK FMEKLGPFFN
401: YVQPTWPILL TSIPGWTGIL LILIMSFSFT LATHSFRRSV VKLPSPLHHL AGFNAFWYAH HLLVIAYVLL VMHSYFIFLT KQWYKRTTWM YLAVPVIFYA
501: SERSIRKIRE RSYRVSIIKA AIYPGNVLSI YMKKPPSFKY KSGMYLFVKC PDVSPFEWHP FSITSAPGDD YLSVHIRTLG DWTSELRNLF GKACEAEVTS
601: KKATLARLET TVVAHGLAED TRFPKVFIDG PYGAPAQNYR KYDILLLIGL GIGATPFISI LKDLLNNIKS NQEMESTHDT ELGCSFKTNG PGRAYFYWVT
701: REQGSFEWFK SVMNEVAESD RDDVIEMHNY LTSVYEEGDA RSALIAMVQS LQHAKNGVDI VSGSKIRTHF ARPNWRKVFS DLASAHKNSR IGVFYCGSPT
801: LTKTLRDLSI EFSSTTTTRF HFHKENF

Best Arabidopsis Sequence Match ( AT5G60010.1 )
(BLAST)

001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

Arabidopsis Description

RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.