CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040805_P003	Maize	cytosol	92.86	95.44
Os01t0360200-01	Rice	plasma membrane	85.93	87.73
HORVU4Hr1G086500.1	Barley	cytosol	78.57	85.92
TraesCS3D01G187300.2	Wheat	cytosol	83.55	85.78
TraesCS3B01G212900.5	Wheat	cytosol	83.44	85.67
TraesCS3A01G182900.1	Wheat	cytosol	83.44	85.57
TraesCS5A01G527600.1	Wheat	cytosol	77.81	84.89
TraesCS4D01G352200.3	Wheat	cytosol	77.71	84.77
TraesCS4B01G358800.1	Wheat	cytosol	77.71	84.77
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	39.29	79.08
CDY65632	Canola	nucleus, peroxisome	10.82	69.44
CDY22644	Canola	plasma membrane	42.86	68.75
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	61.36	67.99
KRH33894	Soybean	cytosol	60.06	67.27
Solyc01g099620.2.1	Tomato	cytosol	60.82	64.97
PGSC0003DMT400063688	Potato	cytosol	60.5	64.48
KRG92895	Soybean	extracellular, mitochondrion	62.01	64.45
KRH68525	Soybean	cytosol	60.71	63.39
VIT_14s0060g02320.t01	Wine grape	cytosol	61.26	63.31
KRG96816	Soybean	cytosol	60.5	63.02
AT1G09090.2	Thale cress	cytosol	56.06	61.45
Bra031658.1-P	Field mustard	cytosol	56.06	61.23
EES16102	Sorghum	plastid	59.85	60.37
CDY06348	Canola	cytosol	53.14	60.17
KXG32613	Sorghum	cytosol, plastid	45.67	51.03
OQU83587	Sorghum	plastid	58.98	50.51
EES01429	Sorghum	mitochondrion	50.97	49.89
KXG22389	Sorghum	mitochondrion	51.41	49.63
OQU87817	Sorghum	cytosol	45.24	48.95
KXG35704	Sorghum	mitochondrion	48.92	44.89
KXG25273	Sorghum	mitochondrion	48.05	44.05
OQU92169	Sorghum	peroxisome, plastid	34.31	37.87
EES10867	Sorghum	plasma membrane	13.64	16.45

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A1W0VXJ9	ncoils:Coil
InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0005509	GO:GO:0005515	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016174	GO:GO:0016491	GO:GO:0043621	GO:GO:0050664
GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	EnsemblPlants:OQU86843
ProteinID:OQU86843	ProteinID:OQU86843.1	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF57
InterPro:RBOHB	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	EnsemblPlantsGene:SORBI_3003G161500	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0009DC83D3	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:19272846..19277057

Molecular Weight (calculated)

103931.0 Da

IEP (calculated)

9.599

GRAVY (calculated)

-0.232

Length

924 amino acids

Sequence
(BLAST)

001: MAATEAAMDT GSSRRSQDDT ATLIPHSGNL GESSQKGVKT TRFKDDDEVV EITIVQRDSV AIEDVRAVDD GSGHGGGFDG LSLVSPSSSR SGKLSSKIRQ
101: VKNGLKMKSS SSKAPQTQLG KNVRKRLNRS KSGAAVALKG LQFVTAKVGH DGWAAVEKRF NQLQVDGVLL RSRFGKCIGN FSGSIEYVSP YSYLNNANTS
201: IALDCAGMDG SDEFAVQVFD SLARKRGITK QLLTKDELKD FWEQLSDQGF DNRLQTFFDM VDKNADGRIT AEEVKEIITL SASANKLSKL KDRADEYTAL
301: IMEELDRDNL GYIELEDLEA LLLQSPSQAA ARSTTQSSKL SKALSMKLAS NKNTGPLYHY WQEFMYFLEE NWKRIWVMTL WLSICIGLFI WKFIQYRNRA
401: VFHIMGYCVC TAKGAAETLK FNMALVLFPV CRNTITWIRS KTKIGAVVPF NDNINFHKVI AAGVAVGVAL HAGAHLTCDF PRLLHASDVA YEPMKPFFGD
501: KRPPNYWWFV KGTEGWTGVV MVVLMTIAFV LAQPWFRRNR LKDSNPLKKM TGFNAFWFTH HLFVIVYALL VVHGICLYLS RKWYKKTTWM YLAVPVLLYV
601: SERIIRLFRS HDAVRIQKVA VYPGNVLALY MSKPPGFRYR SGQYIFINCR AVSPYEWHPF SITSAPGDDY LSVHIRTRGD WTSRLRTVFS EACRPPTDGE
701: SGLLRADLSK GITESNARFP KLLIDGPYGA PAQDYREYDV LLLIGLGIGA TPLISIVKDV LNHIQHGGSV AGTEPDGSGK AKKRPFMTKR AYFYWVTREE
801: GSFEWFRGVM NEVAEKDKDG VIELHNHCSS VYEEGDARSA LIVMLQELQH AKKGVDILSG TSVKTHFARP NWRSVFKHVA VNHENQRVGV FYCGEPVLVP
901: QLRQFSADFT HKTNTKFEFH KENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.