Factsheet for PGSC0003DMT400063688

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g099620.2.1	Tomato	cytosol	97.0	97.23
KRH33894	Soybean	cytosol	77.51	81.45
KRG92895	Soybean	extracellular, mitochondrion	79.47	77.5
KRH68525	Soybean	cytosol	78.66	77.06
KRG96816	Soybean	cytosol	78.43	76.66
CDY22644	Canola	plasma membrane	50.87	76.56
VIT_14s0060g02320.t01	Wine grape	cytosol	78.32	75.95
CDY65632	Canola	nucleus, peroxisome	12.0	72.22
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	67.94	70.62
Bra031658.1-P	Field mustard	cytosol	68.17	69.86
AT1G09090.2	Thale cress	cytosol	67.7	69.63
CDY06348	Canola	cytosol	64.36	68.38
HORVU4Hr1G086500.1	Barley	cytosol	62.4	64.02
TraesCS4B01G358800.1	Wheat	cytosol	61.82	63.28
TraesCS5A01G527600.1	Wheat	cytosol	61.71	63.16
TraesCS4D01G352200.3	Wheat	cytosol	61.71	63.16
Zm00001d009248_P002	Maize	cytosol	64.01	61.87
Zm00001d040805_P003	Maize	cytosol	64.01	61.74
TraesCS5D01G105900.1	Wheat	cytosol	61.59	61.73
TraesCS3B01G212900.5	Wheat	cytosol	63.55	61.22
TraesCS3A01G182900.1	Wheat	cytosol	63.55	61.15
TraesCS3D01G187300.2	Wheat	cytosol	63.44	61.11
TraesCS5B01G099700.1	Wheat	cytosol	61.48	61.05
TraesCS5A01G093600.1	Wheat	cytosol	61.48	60.78
Zm00001d023859_P001	Maize	plastid	63.09	60.64
Os12t0541300-01	Rice	plasma membrane	63.55	60.62
Os01t0360200-01	Rice	plasma membrane	63.21	60.55
OQU86843	Sorghum	cytosol	64.48	60.5
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	64.59	59.7
EES16102	Sorghum	plastid	62.98	59.61
HORVU5Hr1G024550.3	Barley	cytosol	56.4	56.93
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	10.96	53.07
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	27.91	52.72
PGSC0003DMT400066027	Potato	peroxisome	26.76	50.66
PGSC0003DMT400040179	Potato	cytosol	45.21	50.52
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	47.17	49.04
PGSC0003DMT400035268	Potato	mitochondrion	50.75	46.81
PGSC0003DMT400046647	Potato	plasma membrane	15.11	18.74
PGSC0003DMT400046925	Potato	plasma membrane	15.11	17.68
PGSC0003DMT400000536	Potato	plastid	14.42	17.34
PGSC0003DMT400024558	Potato	plasma membrane, vacuole	14.07	17.26
PGSC0003DMT400026254	Potato	plasma membrane	13.84	17.02
PGSC0003DMT400074349	Potato	plasma membrane	13.38	15.53

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EMBL:AB050661	ProteinID:BAB70751
ProteinID:BAB70751.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009408	GO:GO:0009628	GO:GO:0009791
GO:GO:0009845	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016174	GO:GO:0016491
GO:GO:0046872	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927
UniProt:M1CB13	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
EnsemblPlantsGene:PGSC0003DMG400024754	PGSC:PGSC0003DMG400024754	EnsemblPlants:PGSC0003DMT400063688	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222
PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF125	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002948FAC	:	:

Description

Respiratory burst oxidase homolog protein B [Source:PGSC_GENE;Acc:PGSC0003DMG400024754]

Coordinates

chr1:-:77342514..77346601

Molecular Weight (calculated)

99032.2 Da

IEP (calculated)

9.443

GRAVY (calculated)

-0.288

Length

867 amino acids

Sequence
(BLAST)

001: MEIENTRDSD SMRGSRVGFS GSLVSGKKSA RFKDDESYVE ITLDVRDDSV SVQNIKGADH EAALLASRLE KRPNNTLGSQ LSFHLRQVSK ELKRMTSSNK
101: FQKIDRSKSG AARALRGLQF MNKNVGTEGW SEVESRFDQL AVNGMLTKSL FGQCIGMKES SEFAEELFDA LARKRCITSP AVTKDELREF WEQITDTSFD
201: ARLQTFFDMV DKDADGRITQ EEVKEIITLS ASANKLSKIQ DNSDEYAALI MEELDPGNVG YIELYNLETL LLQAPSHSMN LSTNSRVLSQ MLSQKLKPTK
301: ERNPFKRCKR RLDYFIEDNW KRIWVMALWL SICAGLFTWK FIQYKRRAVF DVMGYCVSVA KGGAETTKFN MALVLLPVCR NTITWLRSRT KLGKIIPFDD
401: NINFHKVIAF GIAVGVGLHA ISHLTCDFPR LLHATDEEYE PMKPFFGDER PNNYWWFVKG TEGWTGVVMV VLMIIAYVLA QPWFRRNRLN LPSTIKKLTG
501: FNAFWYSHHL FVIVYVLFII HGYFLYLSKK WYKKTTWMYI AVPMILYACE RLLRAFRSGY KAVKILKVAV YPGNVMAVHM SKPQGFKYTS GQYILVNCSD
601: VSSFQWHPFT ISSAPGDDYL SMHIRTLGDW TSQLKTLFSK VCEPPTGDQS GLLRADIAKA DYKPRLPKLL IDGPYGAPAQ DYKKYDVVLL VGLGIGATPL
701: ISIVKDVLNN IKQQKDIEDG TKGSKRSPFA TKRAYFYWVT REQGSFEWFK GVMDEVSEND QEGLIELHNY CTSVYEEGDA RSALITMLQS IHQAKSGVDI
801: VSGTRVKTHF ARPNWRQVFK RVTINHPDQR IGVFYCGPQG LVGELRHLSQ DFSHKTGTKF EFHKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.