Factsheet for PGSC0003DMT400026254

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024558	Potato	plasma membrane, vacuole	89.79	89.53
KRH35246	Soybean	plasma membrane	60.99	61.25
CDX88061	Canola	plasma membrane	52.48	55.89
CDY44266	Canola	plasma membrane, vacuole	55.32	55.87
AT5G23980.1	Thale cress	plasma membrane	55.32	55.79
CDY46972	Canola	plasma membrane, vacuole	54.75	55.3
Bra029389.1-P	Field mustard	plasma membrane	54.61	55.16
AT5G23990.2	Thale cress	endoplasmic reticulum, plasma membrane	54.18	54.65
GSMUA_Achr8P12260_001	Banana	peroxisome	37.02	52.2
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	9.08	50.39
PGSC0003DMT400000536	Potato	plastid	51.49	50.35
Bra009719.1-P	Field mustard	golgi, plasma membrane	34.89	49.7
GSMUA_Achr8P12250_001	Banana	plasma membrane	49.08	48.87
PGSC0003DMT400074349	Potato	plasma membrane	49.5	46.72
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	14.75	45.61
TraesCS2B01G414300.1	Wheat	plasma membrane	46.67	45.5
TraesCS2D01G393700.1	Wheat	plasma membrane	45.96	44.88
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	17.59	44.44
Os04t0578600-01	Rice	golgi, mitochondrion, vacuole	27.66	43.43
TraesCS2A01G396000.1	Wheat	plasma membrane	46.1	41.88
CDY68445	Canola	plastid	29.93	39.96
VIT_16s0050g00990.t01	Wine grape	plastid	64.4	38.54
GSMUA_Achr8P12270_001	Banana	plasma membrane	49.5	38.35
PGSC0003DMT400046647	Potato	plasma membrane	29.36	29.61
PGSC0003DMT400046925	Potato	plasma membrane	28.94	27.53
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	4.4	17.32
PGSC0003DMT400040179	Potato	cytosol	15.32	13.92
PGSC0003DMT400063688	Potato	cytosol	17.02	13.84
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	16.03	13.55
PGSC0003DMT400035268	Potato	mitochondrion	18.01	13.51
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	17.59	13.22
PGSC0003DMT400066027	Potato	peroxisome	8.09	12.45

Protein Annotations

EntrezGene:102589797	Gene3D:2.40.30.10	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:IPR017927	UniProt:M1AMX2	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	EnsemblPlantsGene:PGSC0003DMG400010125
PGSC:PGSC0003DMG400010125	EnsemblPlants:PGSC0003DMT400026254	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF62	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000295F404	RefSeq:XP_006353911.1	SEG:seg

Description

Ferric-chelate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400010125]

Coordinates

chr3:+:43879402..43884284

Molecular Weight (calculated)

80141.3 Da

IEP (calculated)

9.341

GRAVY (calculated)

0.260

Length

705 amino acids

Sequence
(BLAST)

001: MGSKTILNGF VLLVFVGWLF IWVMLPTPTY KNSWTPHLLI NLDSTYFREQ GINLLLFTFP IMLIAAVSCV YLHLYSKSTS DHSSTNKGRE YFGSWRRPRL
101: VMESLGIVNA VELIFAAMFT LLLIWSLANY IYISYRNLYI MNPAEKVWMT KFRSVALRLG YVGNVCYAFL FFPVTRLSSI LPLVGLTSES SIKYHIWLGH
201: ISMALAVLHS VGFVIYYAVS NQMIQMIEWS SSYVSNVAGE IATLVAIAMW VTSLYKIRRK MFDLFFYTHQ LYTLYIIFYL LHVGVAYTCM ILPGIFLFLI
301: DRYLRFLQSK RSARLISARL LPCSTFELTF SKNPALTYNP TSILFVNVPS VSKLQWHPFT IVSSSNLETD KLSVVIKCMG SWSQKLEKQL SSSPDRLQIS
401: TEGPYGPSSF HFLSRECLVM VSGGSGITPM ISIFRELIYR STLQPNTKVP KVILITSFKN TTDLTMLDLL LPISTTPSNI SNLDFQIEAY ITRENEPQQH
501: DHNNQLELAS KSKQQLLVFK QNPKDSPISA ALGKSSWLWL GAIITSSFFM FLLLLGLVTR YSIYPIERDG KLYHYSAKII WDMFLACASI FIGTSVIFMW
601: QKRENEIEGK QIQNVEIPTN PTNSPVGNLC CTERELESLP QQSIVQATKV HYGARPDLKR ILFGCKASDV GVVVCGPKSM RHEVANICAS GLAQNLHFES
701: ISFNW

Best Arabidopsis Sequence Match ( AT5G23990.2 )
(BLAST)

001: MGNMRSLVKM LMVVLFLGWI FVWIMISTNR FQNIWTPKLA KYLKTTYFGP QGMNLVLLTV PMMFIAVLSC VYLHTQKQPS QTQREWKVKG RMGRVMMVMN
101: PLGIVTATEL TFSLLFLALL VWALSNYLYL SYHVHLHNHD NAKIWQAKFR AFGLRIGYVG HYCWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHVSN
201: FCFLVHTVVF LIYWAMVNKL METFAWNATY VPNLAGTIAM VIGIAIWVTS LPSFRRKKFE IFFYTHHLYG LYIVFYAIHV GDSWFCMILP NIFLFFIDRY
301: LRFLQSTKRS RLVSAKILPS DNLELTFAKT SGLHYTPTSI LFLHVPSISK LQWHPFTITS SSNLEKDTLS VVIRKQGSWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSFDVS RHDSLILVGG GSGVTPFISV IRELIFQSQN RSTKLPNVLL VCAFKNYHDL AFLDLIFPSD ISVSDISKLN LRIEAYITRE DKKPETTDDH
501: KLLQTKWFKP QPLDSPISPV LGPNNFLWLG VVILSSFVMF LLLIGIVTRY YIYPVDHNTG SIYNFTYRVL WVMFLGCVCI FISSSIIFLW RKKENKEGDK
601: DSKKQVQSVE FQTPTSSPGS WFHGHERELE SVPYQSIVQA TSVHFGSKPN LKKILFEAEG SEDVGVMVCG PKKMRHEVAK ICSSGLAKNL HFEAISFNW

Arabidopsis Description

ATFRO5ferric reduction oxidase 5 [Source:TAIR;Acc:AT5G23990]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.