Factsheet for PGSC0003DMT400024558

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026254	Potato	plasma membrane	89.53	89.79
KRH35246	Soybean	plasma membrane	60.82	61.25
AT5G23980.1	Thale cress	plasma membrane	55.45	56.08
CDX88061	Canola	plasma membrane	51.91	55.44
CDY44266	Canola	plasma membrane, vacuole	54.17	54.87
CDY46972	Canola	plasma membrane, vacuole	54.03	54.73
Bra029389.1-P	Field mustard	plasma membrane	53.89	54.58
AT5G23990.2	Thale cress	endoplasmic reticulum, plasma membrane	53.89	54.51
GSMUA_Achr8P12260_001	Banana	peroxisome	36.63	51.8
PGSC0003DMT400000536	Potato	plastid	51.06	50.07
Bra009719.1-P	Field mustard	golgi, plasma membrane	34.65	49.49
GSMUA_Achr8P12250_001	Banana	plasma membrane	48.66	48.59
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	8.49	47.24
PGSC0003DMT400074349	Potato	plasma membrane	48.66	46.05
TraesCS2B01G414300.1	Wheat	plasma membrane	46.11	45.09
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	14.43	44.74
TraesCS2D01G393700.1	Wheat	plasma membrane	45.4	44.46
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	17.4	44.09
Os04t0578600-01	Rice	golgi, mitochondrion, vacuole	27.44	43.21
TraesCS2A01G396000.1	Wheat	plasma membrane	45.54	41.49
CDY68445	Canola	plastid	29.56	39.58
VIT_16s0050g00990.t01	Wine grape	plastid	65.06	39.05
GSMUA_Achr8P12270_001	Banana	plasma membrane	48.09	37.36
PGSC0003DMT400046647	Potato	plasma membrane	29.56	29.9
PGSC0003DMT400046925	Potato	plasma membrane	29.0	27.67
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	4.53	17.88
PGSC0003DMT400040179	Potato	cytosol	16.12	14.69
PGSC0003DMT400063688	Potato	cytosol	17.26	14.07
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	16.27	13.79
PGSC0003DMT400035268	Potato	mitochondrion	18.1	13.62
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	17.4	13.11
PGSC0003DMT400066027	Potato	peroxisome	8.06	12.45

Protein Annotations

EntrezGene:102578945	Gene3D:2.40.30.10	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:IPR017927	UniProt:M1AKC3	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	EnsemblPlantsGene:PGSC0003DMG401009494
PGSC:PGSC0003DMG401009494	EnsemblPlants:PGSC0003DMT400024558	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF62	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002969E7C	RefSeq:XP_006362676.1	SEG:seg

Description

Ferric-chelate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG401009494]

Coordinates

chr3:+:49639886..49644116

Molecular Weight (calculated)

80490.5 Da

IEP (calculated)

9.561

GRAVY (calculated)

0.209

Length

707 amino acids

Sequence
(BLAST)

001: MGSRAVLYTF MVLVFVGWLF IWVMLPTPTY RNSWTPQLKI KLNSTYFREQ GINLLLFTFP IMLIAAVSCV YLHLYNKSTS DHSSTTNKGR EYFGSLKRKV
101: VVMEPLGIVN AVELSFAVMF IVLLIWSLAN YIYISFNGNL HMHNPTEKVW KAKFRSVSLR LGYLGNICYA FLFFPVTRVS SILPLMGLTS ESSIKYHIWL
201: GHLSMALALL HSAGFVIYYA MSNQMIEMIE WSSTYVSNVA GEIAILVAIA MWVTSLYKIR RKMFDLFFYT HQLYTLYMFF YLLHVGVAYT CMVFPGIFLF
301: LIDRYLRFLQ SKRSARLISS RLLPCSTFEL TFSKNPGLTY NPTSILFVNV PSVSKLQWHP FTIVSSSNLE TDKLSVVIKS VGSWSQKLEK QLSSSPDRLQ
401: ISTEGPYGPS SSHFLSRECL VMVSGGSGIA PMISIFRELI YRSTLQTNTK VPKVILITSF KNTSDLTMLD LLLPFSTTPF DISNLDYQIQ AYVTRENEPQ
501: QHDHNNQLEL PSKSKQQLLV FKQNPKDSPI SAALGKSSWL WLGAIITSSF FMFLLLLGLV TRYSIYPIER DGKLYHYSAK IIWDMFLACA SVFIATSVIF
601: MWQKRENEIE GRQIQNVEIP TNPTNSPAAN LCGTERELES LPHQSIVQAT KVHYGTRPDL KRILFDVKAS DVGVVVCGPK SMRHEVANIC ASGLAQNLHF
701: ESISFNW

Best Arabidopsis Sequence Match ( AT5G23990.2 )
(BLAST)

001: MGNMRSLVKM LMVVLFLGWI FVWIMISTNR FQNIWTPKLA KYLKTTYFGP QGMNLVLLTV PMMFIAVLSC VYLHTQKQPS QTQREWKVKG RMGRVMMVMN
101: PLGIVTATEL TFSLLFLALL VWALSNYLYL SYHVHLHNHD NAKIWQAKFR AFGLRIGYVG HYCWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHVSN
201: FCFLVHTVVF LIYWAMVNKL METFAWNATY VPNLAGTIAM VIGIAIWVTS LPSFRRKKFE IFFYTHHLYG LYIVFYAIHV GDSWFCMILP NIFLFFIDRY
301: LRFLQSTKRS RLVSAKILPS DNLELTFAKT SGLHYTPTSI LFLHVPSISK LQWHPFTITS SSNLEKDTLS VVIRKQGSWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSFDVS RHDSLILVGG GSGVTPFISV IRELIFQSQN RSTKLPNVLL VCAFKNYHDL AFLDLIFPSD ISVSDISKLN LRIEAYITRE DKKPETTDDH
501: KLLQTKWFKP QPLDSPISPV LGPNNFLWLG VVILSSFVMF LLLIGIVTRY YIYPVDHNTG SIYNFTYRVL WVMFLGCVCI FISSSIIFLW RKKENKEGDK
601: DSKKQVQSVE FQTPTSSPGS WFHGHERELE SVPYQSIVQA TSVHFGSKPN LKKILFEAEG SEDVGVMVCG PKKMRHEVAK ICSSGLAKNL HFEAISFNW

Arabidopsis Description

ATFRO5ferric reduction oxidase 5 [Source:TAIR;Acc:AT5G23990]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.