Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G23990.2 | Thale cress | endoplasmic reticulum, plasma membrane | 91.56 | 91.56 |
| CDX88061 | Canola | plasma membrane | 85.84 | 90.63 |
| CDY46972 | Canola | plasma membrane, vacuole | 87.12 | 87.25 |
| CDY44266 | Canola | plasma membrane, vacuole | 86.7 | 86.82 |
| Bra029389.1-P | Field mustard | plasma membrane | 86.7 | 86.82 |
| Bra009719.1-P | Field mustard | golgi, plasma membrane | 56.51 | 79.8 |
| CDY68445 | Canola | plastid | 50.07 | 66.29 |
| KRH35246 | Soybean | plasma membrane | 57.8 | 57.55 |
| PGSC0003DMT400024558 | Potato | plasma membrane, vacuole | 56.08 | 55.45 |
| PGSC0003DMT400026254 | Potato | plasma membrane | 55.79 | 55.32 |
| GSMUA_Achr8P12260_001 | Banana | peroxisome | 38.2 | 53.4 |
| GSMUA_Achr8P12300_001 | Banana | extracellular, peroxisome, plastid | 16.31 | 50.0 |
| GSMUA_Achr8P12250_001 | Banana | plasma membrane | 50.07 | 49.44 |
| AT1G01590.1 | Thale cress | plasma membrane | 46.49 | 46.16 |
| TraesCS2B01G414300.1 | Wheat | plasma membrane | 45.49 | 43.98 |
| TraesCS2D01G393700.1 | Wheat | plasma membrane | 45.35 | 43.91 |
| Os04t0578600-01 | Rice | golgi, mitochondrion, vacuole | 28.18 | 43.88 |
| AT1G23020.2 | Thale cress | mitochondrion, plasma membrane | 44.35 | 43.24 |
| AT1G01580.2 | Thale cress | plasma membrane | 49.64 | 43.21 |
| HORVU2Hr1G094150.3 | Barley | golgi, plasma membrane | 16.88 | 42.29 |
| TraesCS2A01G396000.1 | Wheat | plasma membrane | 46.07 | 41.49 |
| GSMUA_Achr8P12270_001 | Banana | plasma membrane | 48.64 | 37.36 |
| VIT_16s0050g00990.t01 | Wine grape | plastid | 59.51 | 35.31 |
| AT5G50160.1 | Thale cress | plasma membrane | 29.33 | 28.16 |
| AT5G49730.1 | Thale cress | plasma membrane | 29.61 | 28.05 |
| AT5G49740.1 | Thale cress | plasma membrane | 29.61 | 27.71 |
| AT1G09090.2 | Thale cress | cytosol | 18.74 | 15.54 |
| AT1G19230.2 | Thale cress | cytosol, peroxisome, plasma membrane | 20.6 | 15.13 |
| AT5G47910.1 | Thale cress | cytosol, peroxisome, plasma membrane | 19.74 | 14.98 |
| AT4G25090.1 | Thale cress | cytosol | 18.17 | 14.96 |
| AT1G64060.1 | Thale cress | cytosol | 20.03 | 14.83 |
| AT5G07390.1 | Thale cress | cytosol | 19.03 | 14.74 |
| AT5G51060.1 | Thale cress | cytosol | 19.03 | 14.7 |
| AT4G11230.1 | Thale cress | cytosol | 18.31 | 13.6 |
| AT5G60010.1 | Thale cress | cytosol | 17.17 | 13.54 |
| AT3G45810.1 | Thale cress | cytosol | 17.17 | 13.16 |
Protein Annotations
| Gene3D:2.40.30.10 | MapMan:25.4.2.1 | MapMan:25.5.2.1 | Gene3D:3.40.50.80 | EntrezGene:832463 | UniProt:A0A178UB87 |
| ProteinID:AED93241.1 | EMBL:AF462813 | ArrayExpress:AT5G23980 | EnsemblPlantsGene:AT5G23980 | RefSeq:AT5G23980 | TAIR:AT5G23980 |
| RefSeq:AT5G23980-TAIR-G | EnsemblPlants:AT5G23980.1 | TAIR:AT5G23980.1 | Symbol:ATFRO4 | Unigene:At.28267 | ProteinID:BAB08721.1 |
| EMBL:BT010474 | InterPro:Cyt_b245_heavy_chain | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 |
| GO:GO:0000293 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR017927 | RefSeq:NP_197786.2 | ProteinID:OAO90930.1 | PFAM:PF01794 |
| PFAM:PF08022 | PFAM:PF08030 | PO:PO:0000293 | PRINTS:PR00466 | PFscan:PS51384 | PANTHER:PTHR11972 |
| PANTHER:PTHR11972:SF62 | UniProt:Q8W110 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix |
| UniParc:UPI00000AA359 | : | : | : | : | : |
Description
FRO4Ferric reduction oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W110]
Coordinates
chr5:-:8097978..8101330
Molecular Weight (calculated)
80255.3 Da
IEP (calculated)
9.797
GRAVY (calculated)
0.183
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNMRSLVKT LMVVLFLGWI LVWIMISTNL FKSKWTPKLS KYLNTTYFGP QGTNLVLLTV PMMFIAVLSC VYLHIQKKPT QPQREWKLKR IMGRVIMVMN
101: PLGIVTATEL TFSLLFVALL AWSLYNYLYL SYHVHLHNDD NAKIWQAKFR AFGLRIGYVG NICWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHVSN
201: FCFLVHTVVF LIYWAMINKL METFAWNPTY VPNLAGTIAM VIGIAMWVTS LPSFRRKKFE IFFYTHHLYG LYIVFYVIHV GDSWFCMILP NIFLFFIDRY
301: LRFLQSTKRS RLVSARILPS DNLELTFSKT PGLHYTPTSI LFLHVPSISK IQWHPFTITS SSNLEKDTLS VVIRRQGSWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSFDVS RHNSLILVSG GSGITPFISV IRELISQSQN KSTKLPDVLL VCSFKHYHDL AFLDLIFPLD MSASDISRLN LRIEAYITRE DKKPETTDDH
501: RLLQTKWFKP QPLDSPISPV LGPNNFLWLG VVILSSFVMF LLLIGIVTRY YIYPVDHNTG SIYNFSYRGL WDMFLGSACI FISSSVVFLW RKKQNKEGDK
601: EFKNQVQSVE FQTPTSSPGS WFHGHERELE SVPYQSIVQA TSVHFGSKPN LKKILLEAEG SEDVGVMVCG PRKMRHEVAK ICSSGLAKNL HFEAISFNW
101: PLGIVTATEL TFSLLFVALL AWSLYNYLYL SYHVHLHNDD NAKIWQAKFR AFGLRIGYVG NICWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHVSN
201: FCFLVHTVVF LIYWAMINKL METFAWNPTY VPNLAGTIAM VIGIAMWVTS LPSFRRKKFE IFFYTHHLYG LYIVFYVIHV GDSWFCMILP NIFLFFIDRY
301: LRFLQSTKRS RLVSARILPS DNLELTFSKT PGLHYTPTSI LFLHVPSISK IQWHPFTITS SSNLEKDTLS VVIRRQGSWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSFDVS RHNSLILVSG GSGITPFISV IRELISQSQN KSTKLPDVLL VCSFKHYHDL AFLDLIFPLD MSASDISRLN LRIEAYITRE DKKPETTDDH
501: RLLQTKWFKP QPLDSPISPV LGPNNFLWLG VVILSSFVMF LLLIGIVTRY YIYPVDHNTG SIYNFSYRGL WDMFLGSACI FISSSVVFLW RKKQNKEGDK
601: EFKNQVQSVE FQTPTSSPGS WFHGHERELE SVPYQSIVQA TSVHFGSKPN LKKILLEAEG SEDVGVMVCG PRKMRHEVAK ICSSGLAKNL HFEAISFNW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.