CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46972	Canola	plasma membrane, vacuole	96.85	96.85
CDX88061	Canola	plasma membrane	86.82	91.54
AT5G23990.2	Thale cress	endoplasmic reticulum, plasma membrane	86.96	86.84
AT5G23980.1	Thale cress	plasma membrane	86.82	86.7
CDY68445	Canola	plastid	55.16	72.92
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	11.32	62.2
KRH35246	Soybean	plasma membrane	56.59	56.27
PGSC0003DMT400026254	Potato	plasma membrane	55.87	55.32
PGSC0003DMT400024558	Potato	plasma membrane, vacuole	54.87	54.17
GSMUA_Achr8P12260_001	Banana	peroxisome	38.54	53.8
CDY69826	Canola	cytosol, plastid, vacuole	26.5	51.82
CDY38013	Canola	golgi, plasma membrane	36.39	51.52
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	16.76	51.32
CDX90043	Canola	golgi, plasma membrane	41.55	49.91
GSMUA_Achr8P12250_001	Banana	plasma membrane	50.0	49.29
CDY07230	Canola	plasma membrane	49.0	48.17
CDY38014	Canola	plasma membrane	45.42	44.96
Os04t0578600-01	Rice	golgi, mitochondrion, vacuole	28.08	43.65
TraesCS2D01G393700.1	Wheat	plasma membrane	44.56	43.07
TraesCS2B01G414300.1	Wheat	plasma membrane	44.56	43.02
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	16.76	41.94
TraesCS2A01G396000.1	Wheat	plasma membrane	45.13	40.59
GSMUA_Achr8P12270_001	Banana	plasma membrane	48.71	37.36
CDY38012	Canola	plasma membrane	15.33	35.31
VIT_16s0050g00990.t01	Wine grape	plastid	58.74	34.8
CDY65711	Canola	plasma membrane	30.23	28.51
CDX71600	Canola	plasma membrane	30.23	28.48
CDY22585	Canola	plasma membrane	29.37	28.28
CDY12264	Canola	plasma membrane	27.94	27.62
CDY65632	Canola	nucleus, peroxisome	4.3	20.83
CDX92674	Canola	mitochondrion	10.32	20.69
CDX86059	Canola	peroxisome, plasma membrane, plastid	11.03	19.69
CDY22644	Canola	plasma membrane	15.62	18.92
CDX92671	Canola	cytosol	17.77	16.4
CDY11053	Canola	cytosol, nucleus, plasma membrane	18.19	15.25
CDX78290	Canola	cytosol	18.48	15.11
CDX81047	Canola	cytosol	18.34	15.02
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	20.06	14.99
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	20.06	14.99
CDY08237	Canola	cytosol, peroxisome, plasma membrane	11.32	14.85
CDY08347	Canola	mitochondrion	19.91	14.72
CDY06348	Canola	cytosol	17.05	14.58
CDX85316	Canola	cytosol, nucleus, plasma membrane	19.2	14.53
CDX86335	Canola	cytosol, nucleus, plasma membrane	19.2	14.53
CDX81049	Canola	cytosol	17.77	14.47
CDY38202	Canola	mitochondrion	19.2	14.21
CDY35764	Canola	cytosol, nucleus, plasma membrane	18.19	14.13
CDX70035	Canola	cytosol	17.91	14.11
CDY11054	Canola	cytosol, nucleus, plasma membrane	16.33	13.97
CDY41031	Canola	cytosol, peroxisome, plasma membrane	20.34	13.96
CDY26109	Canola	mitochondrion	11.75	13.9
CDY25278	Canola	cytosol, peroxisome, plasma membrane	18.48	13.83
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	18.19	13.79
CDY26689	Canola	cytosol, peroxisome, plasma membrane	20.06	13.77
CDY38845	Canola	cytosol, peroxisome, plasma membrane	17.91	13.74
CDY32647	Canola	cytosol, peroxisome, plasma membrane	17.91	13.74
CDX98976	Canola	cytosol	17.77	13.66
CDY09233	Canola	cytosol	17.19	13.57
CDY63433	Canola	cytosol	18.05	13.31
CDX99140	Canola	cytosol, peroxisome, plasma membrane	16.05	13.27
CDX92675	Canola	cytosol	5.01	9.07
CDX86058	Canola	cytosol	4.01	8.09
CDY22645	Canola	cytosol	2.44	7.52
CDY70539	Canola	nucleus	2.58	5.88
CDY34341	Canola	nucleus	2.15	5.79

Protein Annotations

Gene3D:2.40.30.10	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	GO:A0A078I338	UniProt:A0A078I338
EnsemblPlants:CDY44266	ProteinID:CDY44266	ProteinID:CDY44266.1	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00079777001	InterPro:IPR017927
PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF62
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EE1F8D	SEG:seg

Description

BnaC02g41510DBnaC02g41510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I338]

Coordinates

chrLK032584:-:32424..35844

Molecular Weight (calculated)

80398.9 Da

IEP (calculated)

9.617

GRAVY (calculated)

0.237

Length

698 amino acids

Sequence
(BLAST)

001: MGDMRNLLKM LMMVVFVGWM FVWVMISTNL FKNKWTPKMT KYFNTTYFGP QGINLVLLTV PMMFIAVLSC LYLHIQKKPT QTQSKSKIKG RMGRVMMVMN
101: PLGIVTATEF TFSILFVALL IWALANYLYI SYFVSLHNHD NAELWMAKFR AFGLRIGYVG HYCWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHISN
201: FLFLVHTVVF LIYWAMTNQL MDTFAWNPTY VPNLAGTIAM VIGIVMWVTS FPYYRRKKFE IFFYTHHLYV LYIIFYMIHV GDSWLCMILP NMFLFFIDRY
301: LRFLQSTKRS RLVSARILPS DNLELTFSKT PGLQYTPTSI LFLHVPSISK LQWHPFTITS NSNLEKDTLS VVIRRQGTWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSLDLR HDSLILVSGG SGVTPFISVI RELIFQAQSQ STKIPDVLLV CAFKYYHDLA FLDLIFPPDI SVSDISRLNL RIEAYITQED KKPEAADDTR
501: LLQTKWFKPQ PLDSPISPVL GPNNILWLGV VILSSFVMFL LLIAIVTRYY IYPVDRNTGK IYNFSYRVLW DMFLGCVCIF ISSSAVFLWR KKVNKEGDKE
601: SKKQVQSVDF QTPTSSPGSW FCSHDRELES VPYQSIVQAT SVHFGSKPNL KKILFEAEGS EDVGVMVCGP RKMRHEVARI CSSGLAKNLH FEAISFNW

Best Arabidopsis Sequence Match ( AT5G23990.2 )
(BLAST)

001: MGNMRSLVKM LMVVLFLGWI FVWIMISTNR FQNIWTPKLA KYLKTTYFGP QGMNLVLLTV PMMFIAVLSC VYLHTQKQPS QTQREWKVKG RMGRVMMVMN
101: PLGIVTATEL TFSLLFLALL VWALSNYLYL SYHVHLHNHD NAKIWQAKFR AFGLRIGYVG HYCWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHVSN
201: FCFLVHTVVF LIYWAMVNKL METFAWNATY VPNLAGTIAM VIGIAIWVTS LPSFRRKKFE IFFYTHHLYG LYIVFYAIHV GDSWFCMILP NIFLFFIDRY
301: LRFLQSTKRS RLVSAKILPS DNLELTFAKT SGLHYTPTSI LFLHVPSISK LQWHPFTITS SSNLEKDTLS VVIRKQGSWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSFDVS RHDSLILVGG GSGVTPFISV IRELIFQSQN RSTKLPNVLL VCAFKNYHDL AFLDLIFPSD ISVSDISKLN LRIEAYITRE DKKPETTDDH
501: KLLQTKWFKP QPLDSPISPV LGPNNFLWLG VVILSSFVMF LLLIGIVTRY YIYPVDHNTG SIYNFTYRVL WVMFLGCVCI FISSSIIFLW RKKENKEGDK
601: DSKKQVQSVE FQTPTSSPGS WFHGHERELE SVPYQSIVQA TSVHFGSKPN LKKILFEAEG SEDVGVMVCG PKKMRHEVAK ICSSGLAKNL HFEAISFNW

Arabidopsis Description

ATFRO5ferric reduction oxidase 5 [Source:TAIR;Acc:AT5G23990]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.