CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	95.47	93.52
CDX92674	Canola	mitochondrion	39.09	91.67
CDX92675	Canola	cytosol	42.4	89.64
CDY11053	Canola	cytosol, nucleus, plasma membrane	82.97	81.27
CDX92671	Canola	cytosol	74.88	80.82
AT4G25090.1	Thale cress	cytosol	70.1	67.37
CDY32647	Canola	cytosol, peroxisome, plasma membrane	64.71	58.02
CDY38845	Canola	cytosol, peroxisome, plasma membrane	64.58	57.91
CDY22644	Canola	plasma membrane	39.58	56.08
CDY65632	Canola	nucleus, peroxisome	9.44	53.47
CDY26109	Canola	mitochondrion	37.62	52.03
CDY08237	Canola	cytosol, peroxisome, plasma membrane	33.09	50.75
CDX70035	Canola	cytosol	54.04	49.77
CDX81047	Canola	cytosol	51.47	49.3
VIT_19s0014g02830.t01	Wine grape	cytosol	50.74	49.29
CDY35764	Canola	cytosol, nucleus, plasma membrane	54.04	49.05
CDX81049	Canola	cytosol	51.35	48.89
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	54.78	48.53
CDX98976	Canola	cytosol	53.92	48.46
CDX78290	Canola	cytosol	50.61	48.36
KRH41026	Soybean	mitochondrion	52.45	48.2
CDX86335	Canola	cytosol, nucleus, plasma membrane	54.17	47.94
CDX85316	Canola	cytosol, nucleus, plasma membrane	54.04	47.83
KRH59706	Soybean	cytosol	52.57	47.77
KRH63901	Soybean	cytosol, nucleus, plasma membrane	53.68	47.2
CDY06348	Canola	cytosol	46.81	46.81
KRH54051	Soybean	cytosol, nucleus, plasma membrane	53.19	46.12
CDX86059	Canola	peroxisome, plasma membrane, plastid	19.61	40.92
CDY08347	Canola	mitochondrion	46.57	40.25
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	45.96	40.15
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	45.1	39.4
CDY38202	Canola	mitochondrion	45.34	39.24
CDY09233	Canola	cytosol	40.07	36.99
CDY63433	Canola	cytosol	42.65	36.75
CDY41031	Canola	cytosol, peroxisome, plasma membrane	45.71	36.68
CDY25278	Canola	cytosol, peroxisome, plasma membrane	41.79	36.55
CDY26689	Canola	cytosol, peroxisome, plasma membrane	44.24	35.5
CDX99140	Canola	cytosol, peroxisome, plasma membrane	34.8	33.65
CDY34341	Canola	nucleus	9.8	30.89
CDX86058	Canola	cytosol	11.76	27.75
CDY22645	Canola	cytosol	7.35	26.55
CDY70539	Canola	nucleus	9.56	25.49
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	3.19	20.47
CDY38013	Canola	golgi, plasma membrane	10.29	17.04
CDX88061	Canola	plasma membrane	13.73	16.92
CDY44266	Canola	plasma membrane, vacuole	13.97	16.33
CDY69826	Canola	cytosol, plastid, vacuole	7.11	16.25
CDY46972	Canola	plasma membrane, vacuole	13.85	16.19
CDX90043	Canola	golgi, plasma membrane	11.27	15.83
CDY38014	Canola	plasma membrane	12.99	15.04
CDY07230	Canola	plasma membrane	12.75	14.65
CDY12264	Canola	plasma membrane	12.62	14.59
CDY22585	Canola	plasma membrane	12.75	14.34
CDY65711	Canola	plasma membrane	12.25	13.51
CDX71600	Canola	plasma membrane	12.25	13.5
CDY68445	Canola	plastid	8.46	13.07
CDY38012	Canola	plasma membrane	3.43	9.24

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:3.40.50.80	GO:A0A078FDR2	UniProt:A0A078FDR2
EnsemblPlants:CDY11054	ProteinID:CDY11054	ProteinID:CDY11054.1	ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664
GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00049012001	InterPro:IPR002048	InterPro:NADPH_Ox	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PFAM:PF13405	PRINTS:PR00466	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EDF018	SEG:seg	:	:

Description

BnaA03g47130DBnaA03g47130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDR2]

Coordinates

chrLK032008:-:832528..836860

Molecular Weight (calculated)

93817.2 Da

IEP (calculated)

9.491

GRAVY (calculated)

-0.225

Length

816 amino acids

Sequence
(BLAST)

001: MTSDTEEENS SDITPHNPVM ENVGGAVGPS VRENPGTKQN NLLNQIKHFA GKPSRLDRSK STTGQALRGL KFISKADGAD GWTAVEERFE TITKTTEGLL
101: IRSKFGECIG MKSKDFALVL FDALARRKHM TGDVIDKEML KEFWEQISDQ NFDSRLMIFF DMMDKDGDGR LTEDEVRQII YLTMIMEELD PHKTGYIMVD
201: NLKILLMQAE TLPEITNSEE RRQPVEKITK KFNDTPYPSP SRTMYRRLRF FVLDSWQRIW VIALWLTITA ILFTYKYIQY KNRAVYEVLG HCVCFAKGSA
301: ETLKLNMALV LLPVCRNTIT WLRNKTRFGV LVPFDDNINF HKVIAVGITI GVGIHSIAHL ACDFPRLIAA TPEEYKPLGK YFGEEQPKRY SHFVKSTEGI
401: TGLLMVLLMA IAFTLALPWF RRGKLEKTLL KPLKKLASFN AFWYTHHLFV VVYILLIVHG YYLYLSKEWY KKTTWMYLAV PIALYACERL IRAFRSSIRT
501: VKVVNAAVYP GNVLTLKICS KHFKYKSGQY IFVNCPKVSP FEWYNRKPIL IDGYLSVHIK SAGDWTNAIK EVFSECGKDN SKMSQVMSKP PPVRDTSHGA
601: NNPDYPKIMI DGPYGTSAQD YKKYDVVLLI GLGIGATRMI SIIKDIVNNM YAMENAQLRQ MENGLEHVPQ DKTENFKTKR AYFYWVTREQ GPYDWFMDIM
701: NEIAARDVNK IIELHNYCIN VFEEDDGARS ALIRMLQSIA YAKSGKDIVS ETRVMSHFAR PNLEHVYRKV AMDHPAGTNV GVFYCGTPLL AKELRRLALK
801: FTHKTKIRFS FHNENL

Best Arabidopsis Sequence Match ( AT4G25090.1 )
(BLAST)

001: MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK
101: TDGNAAWTVV EKRYLKITAN TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR LITFFDLMDK DSDGRLTEDE
201: VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS
301: WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH
401: SVSHLACDFP LLIAATPAEY MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK LASFNAFWYT HHLFVIVYIL
501: LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD
601: DYLSVHIKAL GDWTEAIQGV FSEVSKPPPV GDMLNGANSP RFPKIMIDGP YGAPAQDYKK YEVVLLIGLG IGATPMISII KDIINNTETK EQLSQMEKGS
701: PQEQQGNKET FKTRRAYFYW VTKEQGTFDW FKNIMNEIAE RDKSKVIELH NHCTSVYEEG DVRSALIRML QSLNYAKNGL DIVAGTRVMS HFARPNWKNV
801: YKQIAMDHPG ANVGVFYCGA PVLTKELRQL ALEFTHKTST RFSFHKENF

Arabidopsis Description

RBOHGPutative respiratory burst oxidase homolog protein G [Source:UniProtKB/Swiss-Prot;Acc:Q9SW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.