CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86335	Canola	cytosol, nucleus, plasma membrane	98.59	98.59
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	91.0	91.1
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	90.24	90.34
CDY35764	Canola	cytosol, nucleus, plasma membrane	85.57	87.76
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	72.99	72.84
VIT_01s0150g00450.t01	Wine grape	cytosol	69.09	69.01
CDY22644	Canola	plasma membrane	41.32	66.15
CDY65632	Canola	nucleus, peroxisome	9.98	63.89
CDY32647	Canola	cytosol, peroxisome, plasma membrane	62.04	62.86
CDY38845	Canola	cytosol, peroxisome, plasma membrane	62.04	62.86
CDX92671	Canola	cytosol	49.78	60.71
CDX70035	Canola	cytosol	57.81	60.16
CDX98976	Canola	cytosol	57.59	58.48
CDY11053	Canola	cytosol, nucleus, plasma membrane	52.82	58.46
CDX81049	Canola	cytosol	53.69	57.76
CDY06348	Canola	cytosol	51.08	57.72
CDX81047	Canola	cytosol	52.82	57.16
CDX92674	Canola	mitochondrion	21.26	56.32
CDX78290	Canola	cytosol	51.74	55.85
CDY11054	Canola	cytosol, nucleus, plasma membrane	47.83	54.04
CDY26109	Canola	mitochondrion	33.73	52.71
CDY08237	Canola	cytosol, peroxisome, plasma membrane	30.37	52.63
CDY08347	Canola	mitochondrion	52.82	51.59
CDX92675	Canola	cytosol	21.58	51.55
CDX86059	Canola	peroxisome, plasma membrane, plastid	21.69	51.15
CDY38202	Canola	mitochondrion	50.33	49.2
CDY63433	Canola	cytosol	48.05	46.78
CDY25278	Canola	cytosol, peroxisome, plasma membrane	47.18	46.62
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	46.75	46.15
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	46.53	45.93
CDY09233	Canola	cytosol	41.65	43.44
CDY41031	Canola	cytosol, peroxisome, plasma membrane	46.53	42.18
CDY26689	Canola	cytosol, peroxisome, plasma membrane	45.12	40.9
CDX99140	Canola	cytosol, peroxisome, plasma membrane	36.33	39.69
CDY34341	Canola	nucleus	10.63	37.84
CDY70539	Canola	nucleus	11.71	35.29
CDY22645	Canola	cytosol	7.92	32.3
CDX86058	Canola	cytosol	11.28	30.06
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.93	21.26
CDY38013	Canola	golgi, plasma membrane	10.74	20.08
CDX88061	Canola	plasma membrane	14.21	19.79
CDY69826	Canola	cytosol, plastid, vacuole	7.48	19.33
CDY44266	Canola	plasma membrane, vacuole	14.53	19.2
CDY46972	Canola	plasma membrane, vacuole	14.43	19.05
CDX90043	Canola	golgi, plasma membrane	11.71	18.59
CDY07230	Canola	plasma membrane	14.1	18.31
CDY38014	Canola	plasma membrane	13.88	18.16
CDY22585	Canola	plasma membrane	14.21	18.07
CDY12264	Canola	plasma membrane	13.34	17.42
CDY65711	Canola	plasma membrane	12.58	15.68
CDX71600	Canola	plasma membrane	12.58	15.65
CDY68445	Canola	plastid	8.57	14.96
CDY38012	Canola	plasma membrane	3.36	10.23

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078D7N4
EnsemblPlants:CDX85316	ProteinID:CDX85316	ProteinID:CDX85316.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00142980001
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF94	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
UniParc:UPI0004EDADA1	SEG:seg	:	:	:	:

Description

BnaC07g26270D

Coordinates

chrLK031841:+:1100294..1104918

Molecular Weight (calculated)

103860.0 Da

IEP (calculated)

9.395

GRAVY (calculated)

-0.223

Length

922 amino acids

Sequence
(BLAST)

001: MRRGNSGTDH ELGILRGAHS DTNSDNESNA SDRSAFSGPL GRPKRTSKKN ARFAADLPTR STSLSDGGVG RGGEDDEYVE ITLDIRDDSV AVHSVQQASP
101: GGGTHEDPEL TLLTKKTLES NLNNSASLSF FRSTSSRIKN ASRELRRVFS RRSTPAVRRF DRTSSAAVHA LKGLKFIATK TAAWPAVDQR FDKLSLDSNG
201: LLLSSKFWEC LGMNKESKDF ADQLFRALAR RNNISGDAIT KEQLRVFWEQ ISDESFDAKL QVFFDMVDKD EDGRVTEEEV AEIISLSASA NKLSNIQKQA
301: KEYAALIMEE LDPDNAGYIM IENLEMLLLQ APNQSVRMGD SRILSQMISQ KLKPAKETNP LVRWSEKIKY FVLDNWQRLW IMMLWLGICC GLFAYKFIQY
401: RNKAAYDVMG YCVCVAKGGA ETLKFNMALI LLPVCRNTIT WLRNKTKLGV VVPFDDNLNF HKVIASGIVV GGLLHVVAHL ACDFPRIIAA DEDTYEPMIP
501: YFGEQPESYW WFVKGVEGVT GIIMVVLMAI AFTLATPWFR RNKLNLPNFL KKLTGFNAFW YSHHLFIIVY ALLIVHGIKL YLTKIWYQKT TWMYLAVPML
601: LYASERLLRA LRSSIKPVKI LKVAVYPGNV LSLHVTKPQG FKYKSGQYMF VNCRAVSPFE WHPFSITSAP GDDYLSVHIR TLGDWTRKLR TVFSEVCKPP
701: TAGKSGLLRA DGGDSVAFPT VLIDGPYGAP AQDYKKYDVV LLVGLGIGAT PMISILKDII SNMKTDAHDR DIENNNSNGN SKGFRTRKAY FYWVTREQGS
801: FEWFKGIMDE VAELDEEGII ELHNYCTSVY EDGDARVALI AMLQSLQHAK NGVDVVSGTR VKSHFAKPNW RQVYKRIAVQ HPGKRIGVFY CGAPAPTKEL
901: KNLALDFSRK TTTKFDFHKE NF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.