Factsheet for VIT_01s0150g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0150g00450.t01	Wine grape	cytosol	88.42	88.52
GSMUA_Achr10P...	Banana	plasma membrane	42.64	75.62
GSMUA_Achr6P11760_001	Banana	golgi	33.23	75.25
CDY35764	Canola	cytosol, nucleus, plasma membrane	71.1	73.08
CDX85316	Canola	cytosol, nucleus, plasma membrane	72.84	72.99
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	72.62	72.86
Os11t0537400-01	Rice	plasma membrane	3.46	72.73
CDX86335	Canola	cytosol, nucleus, plasma membrane	72.4	72.56
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	72.29	72.53
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	72.19	72.42
Bra037520.1-P	Field mustard	cytosol	72.19	72.34
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	62.66	69.42
GSMUA_Achr6P11770_001	Banana	cytosol	30.09	69.15
GSMUA_Achr6P16270_001	Banana	cytosol	63.85	68.53
GSMUA_Achr10P...	Banana	cytosol	66.88	67.25
GSMUA_Achr10P...	Banana	nucleus, plastid	20.24	67.03
VIT_14s0060g02320.t01	Wine grape	cytosol	64.72	66.89
TraesCS4B01G327800.2	Wheat	cytosol	65.58	66.09
TraesCS4D01G324800.1	Wheat	cytosol	65.58	66.01
TraesCS5A01G499900.1	Wheat	cytosol	65.58	65.94
VIT_19s0014g02830.t01	Wine grape	cytosol	59.85	65.83
TraesCS5B01G299000.1	Wheat	cytosol	64.61	65.03
TraesCS5A01G301700.1	Wheat	cytosol	64.39	64.67
TraesCS5D01G306400.1	Wheat	cytosol	64.18	64.67
Zm00001d052653_P003	Maize	cytosol, plastid	66.88	63.65
HORVU4Hr1G081670.1	Barley	cytosol	65.69	62.13
Zm00001d007421_P004	Maize	cytosol	60.61	59.07
OQU83587	Sorghum	plastid	67.64	57.92
TraesCS1B01G295100.1	Wheat	plasma membrane	42.42	57.39
Zm00001d007430_P002	Maize	cytosol	49.78	55.96
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	27.6	55.31
HORVU1Hr1G072160.5	Barley	cytosol	55.74	55.08
VIT_02s0025g00510.t01	Wine grape	cytosol	55.52	54.4
TraesCS1A01G285700.1	Wheat	cytosol	54.65	54.07
Zm00001d007426_P001	Maize	cytosol, plastid	57.68	53.57
HORVU1Hr1G072140.1	Barley	cytosol	52.16	51.88
TraesCS1B01G295300.1	Wheat	cytosol	47.62	51.64
TraesCS1D01G284800.1	Wheat	plastid	55.74	51.55
TraesCS1A01G357100.1	Wheat	cytosol	35.39	50.23
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	49.03	49.4
HORVU5Hr1G078630.1	Barley	cytosol	51.3	49.12
VIT_06s0004g03790.t01	Wine grape	nucleus	45.24	49.06
TraesCS1D01G285000.1	Wheat	cytosol	46.65	47.47
HORVU0Hr1G013380.4	Barley	plastid	37.66	44.27
TraesCS1D01G284900.1	Wheat	cytosol	53.03	42.24
TraesCS1B01G295200.1	Wheat	cytosol	53.14	40.15
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.44	36.62
VIT_17s0000g09160.t01	Wine grape	plasma membrane	14.61	19.2
VIT_15s0046g01900.t01	Wine grape	plasma membrane	12.88	17.17
VIT_12s0035g02150.t01	Wine grape	plasma membrane	13.64	17.14
VIT_15s0046g01920.t01	Wine grape	plasma membrane	13.31	16.4
VIT_16s0050g00980.t01	Wine grape	plasma membrane	12.66	16.39
VIT_16s0050g00990.t01	Wine grape	plastid	13.42	10.53

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:100262614	wikigene:100262614	Gene3D:2.40.30.10	Gene3D:3.40.50.80
ProteinID:CCB52283	ProteinID:CCB52283.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
UniProt:F6HJ86	InterPro:FAD-bd_8	EMBL:FN595770	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	EntrezGene:LOC100262614
wikigene:LOC100262614	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF94
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000210823C
ArrayExpress:VIT_01s0150g00440	EnsemblPlantsGene:VIT_01s0150g00440	EnsemblPlants:VIT_01s0150g00440.t01	RefSeq:XP_002268604	RefSeq:XP_002268604.1	SEG:seg

Description

No Description!

Coordinates

chr1:-:22798599..22802956

Molecular Weight (calculated)

104371.0 Da

IEP (calculated)

9.379

GRAVY (calculated)

-0.259

Length

924 amino acids

Sequence
(BLAST)

001: MMRIDDNSDT ESVQSDKASY SGPLAGPPNK KRSARKSARF NIPPETSPQL KTSSVTRRDD DDAYVEITLD ILDDSIAVHS VQAAGGAKGE DPELALLAKK
101: TLEKKSSLGS SVFRNTSSRI KQVSQELKRF ASLSRRPSAR HFDRTKSAVT HALKGLKFIT TKAGGGAAGW PAVEKRFDEL TAPTNGHLHF SLFCECIGRM
201: KDSKEFAGEL FHALARRHNI TGDSIDKAQL KAFWEQISDQ GFDSRLQTFF DMVDKNADGR ITEEEVGEII SLSASANKLS NIQKQANEYA ALIMEELDPD
301: NVGYIMVQNL ETLLLQAPNQ SVRVGDSRIL SQLLSQKLKP TQENNPLRRW YQKTKYFIMD NWQRLWVMML WLGIVASLFT YKFVQYRHKA AYEVMGYCVC
401: TAKGAAETLK FNMALILLPV CRNTITWLRN KTKLGIVVPF DDNLNFHKVI AVAIAVGVAL HAGAHLTCDF PRLIHATEEA YEPMEPYFGE EQPSDIWWFL
501: KGVEGVTGII IVVLMAIAFT LATPWFRRNK LNLPVTLKKL SGFNAFWYSH HLFVIVYVLL IVHGIYLYLT KEWYNKTTWM YIAVPVALYA CERLIRAFRS
601: TIKPVKILKV AVYPGNVLTL HMTKPQGFKY RSGQYMFVNC SAVSPFEWHP FSITSAPGDD YLSVHIRTLG DWTRQLKTVF SEVCLPPTGG KSGLLRADCS
701: QEGDGPNFPK ILIDGPYGAP AQDYKKYDVV LLVGLGIGAT PMISIVKDII SNMKTKDQET EDIQITVETT PDHDNGNRKK KNKKTFKTKR AYYYWVTREQ
801: GSFEWFKGIM NEVAEMDEKG VIELHNYCTS VFEEGDARSA LITMLQSLHH AKNGVDVVSG TRVKSHFAKP NWRQVFKKIA IQHPDSRVGV FYCGAPALTK
901: DLRQLALDFS HRTTTKFDFH KENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.