Factsheet for VIT_15s0046g01920.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g01900.t01	Wine grape	plasma membrane	84.27	91.2
VIT_16s0050g00980.t01	Wine grape	plasma membrane	58.93	61.9
KRH48086	Soybean	plasma membrane	59.07	61.7
KRH00822	Soybean	plasma membrane	58.27	60.95
PGSC0003DMT400000536	Potato	plastid	58.13	60.47
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	57.33	59.81
KRH06603	Soybean	plasma membrane	57.07	59.61
GSMUA_Achr8P12260_001	Banana	peroxisome	38.0	57.0
Solyc01g094890.2.1	Tomato	plasma membrane	54.13	56.94
GSMUA_Achr8P12250_001	Banana	plasma membrane	53.07	56.21
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	13.87	53.33
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	16.0	52.63
TraesCS2B01G414300.1	Wheat	plasma membrane	48.27	50.07
TraesCS2D01G393700.1	Wheat	plasma membrane	47.47	49.31
Os04t0578600-01	Rice	golgi, mitochondrion, vacuole	28.8	48.11
TraesCS2A01G396000.1	Wheat	plasma membrane	47.73	46.13
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	16.13	43.37
GSMUA_Achr8P12270_001	Banana	plasma membrane	50.0	41.21
VIT_16s0050g00990.t01	Wine grape	plastid	53.07	33.79
VIT_17s0000g09160.t01	Wine grape	plasma membrane	29.73	31.72
VIT_12s0035g02150.t01	Wine grape	plasma membrane	29.73	30.34
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	5.6	19.72
VIT_02s0025g00510.t01	Wine grape	cytosol	19.07	15.16
VIT_14s0060g02320.t01	Wine grape	cytosol	17.87	14.99
VIT_06s0004g03790.t01	Wine grape	nucleus	16.93	14.91
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	17.33	14.18
VIT_19s0014g02830.t01	Wine grape	cytosol	15.2	13.57
VIT_01s0150g00450.t01	Wine grape	cytosol	16.67	13.54
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	16.4	13.31

Protein Annotations

EntrezGene:100256818	wikigene:100256818	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	ProteinID:CCB62462
ProteinID:CCB62462.1	UniProt:F6I666	InterPro:FAD-bd_8	EMBL:FN596755	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927	EntrezGene:LOC100256818
wikigene:LOC100256818	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF41	SUPFAM:SSF52343	TMHMM:TMhelix	UniParc:UPI0002109C06	ArrayExpress:VIT_15s0046g01920	EnsemblPlantsGene:VIT_15s0046g01920
EnsemblPlants:VIT_15s0046g01920.t01	unigene:Vvi.11920	RefSeq:XP_002275942	RefSeq:XP_002275942.2	SEG:seg	:

Description

No Description!

Coordinates

chr15:-:18754237..18759433

Molecular Weight (calculated)

83605.1 Da

IEP (calculated)

10.289

GRAVY (calculated)

0.241

Length

750 amino acids

Sequence
(BLAST)

001: MDPTVKKQSS SSDGTIRAVR AAIRLLALMI FLGILVLFVM MPTNTYKKKW FVQVVATTDS TYFGRQGATI LIYTFPVLFS AVLGCAYLHL GKKLNNNKSK
101: SSPKDRLAVL KRPVLVKGPL GIVSMIEMLF LVMFIALLVW SIYTYLRTGF QGIEDKAAKK GEKLWVSKLG AAALRLALTG NIALAFLFFP VARGSSILPL
201: IGLTSEASIK YHIWLGHTCL TLFTTHGVCF IIRWIAKDSI WKQIREWDRT GVSILAGEIS LVGGLVMWVT TFPRIRRKKF ELFFYTHYLY IIFMLFFILH
301: VGITYAFISL PSFYLFLVDR YLRFLQSQRK VRLISARVLP CETVELNFSK TPGLQYSPMS ILFVNLPSVS KLQWHPFTVT SNSNLEQDKL SVTIKGDGSW
401: SKKLYQMLSS SSSVDHLEAS IEGPYGPVST NFLGHDTLVM VSGGSGITPF ISVIRELIFS SSVLKIKTPK ILLISSFKSS SDLTMLDLIL PISGGPLDLS
501: GLRLQVEAYV TREKEPATEN VKPLQALWFK PKATDAPASA ILGPNSWLWL GAVISSSFVI FLVLMGLLTR YYIYPIDHNT GLDYPTSAQA AFNILLMCVS
601: IAITASGAVL WNKKQNTMEA RQVQNMEGSS AYGSPASFYN SDKELESLPR QSLIQSTKVH YGERPDLKRI LFDCKGKKVG VLASGPKKMR HEVATICSSG
701: LADNLHFESI SFSWLGCYKG TAGCRRVVDT TKLRRRLQQM ELSSVKGARL

Best Arabidopsis Sequence Match ( AT1G01580.2 )
(BLAST)

001: MKENKKQDPW GRVTCMEHAT SLLHPIPTQN SLFIYTLSLP LLPSKQANSI LLTKAIVPIL ISLASERERD RNPERKERME IEKSNNGGSN PSAGEEFKDM
101: IKGVTKFLMM VIFLGTIMLW IMMPTLTYRT KWLPHLRIKF GTSTYFGATG TTLFMYMFPM MVVACLGCVY LHFKNRKSPH HIDRETKGGV WSKLRKPMLV
201: KGPLGIVSVT EITFLAMFVA LLLWCFITYL RNSFATITPK SAAAHDESLW QAKLESAALR LGLIGNICLA FLFLPVARGS SLLPAMGLTS ESSIKYHIWL
301: GHMVMALFTV HGLCYIIYWA SMHEISQMIM WDTKGVSNLA GEIALAAGLV MWATTYPKIR RRFFEVFFYT HYLYIVFMLF FVLHVGISFS FIALPGFYIF
401: LVDRFLRFLQ SRENVRLLAA RILPSDTMEL TFSKNSKLVY SPTSIMFVNI PSISKLQWHP FTITSSSKLE PEKLSIVIKK EGKWSTKLHQ RLSSSDQIDR
501: LAVSVEGPYG PASADFLRHE ALVMVCGGSG ITPFISVIRD LIATSQKETC KIPKITLICA FKKSSEISML DLVLPLSGLE TELSSDINIK IEAFITRDND
601: AGDEAKAGKI KTLWFKPSLS DQSISSILGP NSWLWLGAIL ASSFLIFMII IGIITRYYIY PIDHNTNKIY SLTSKTIIYI LVISVSIMAT CSAAMLWNKK
701: KYGKVESKQV QNVDRPSPTS SPTSSWGYNS LREIESTPQE SLVQRTNLHF GERPNLKKLL LDVEGSSVGV LVCGPKKMRQ KVAEICSSGL AENLHFESIS
801: FSW

Arabidopsis Description

FRO2ferric reduction oxidase 2 [Source:TAIR;Acc:AT1G01580]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.