Factsheet for VIT_01s0150g00450.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	88.52	88.42
GSMUA_Achr10P...	Banana	plasma membrane	42.15	74.66
GSMUA_Achr6P11760_001	Banana	golgi	32.5	73.53
CDY35764	Canola	cytosol, nucleus, plasma membrane	67.5	69.3
CDX85316	Canola	cytosol, nucleus, plasma membrane	69.01	69.09
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	68.8	68.95
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	68.69	68.84
CDX86335	Canola	cytosol, nucleus, plasma membrane	68.69	68.76
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	68.58	68.73
Bra037520.1-P	Field mustard	cytosol	68.58	68.66
Os11t0537400-01	Rice	plasma membrane	3.25	68.18
GSMUA_Achr6P16270_001	Banana	cytosol	61.65	66.09
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	59.05	65.35
VIT_14s0060g02320.t01	Wine grape	cytosol	62.3	64.32
GSMUA_Achr10P...	Banana	cytosol	63.92	64.2
VIT_19s0014g02830.t01	Wine grape	cytosol	57.85	63.57
TraesCS4B01G327800.2	Wheat	cytosol	63.06	63.47
TraesCS5A01G499900.1	Wheat	cytosol	63.16	63.44
TraesCS4D01G324800.1	Wheat	cytosol	63.06	63.4
GSMUA_Achr6P11770_001	Banana	cytosol	27.52	63.18
TraesCS5B01G299000.1	Wheat	cytosol	61.43	61.76
TraesCS5D01G306400.1	Wheat	cytosol	61.32	61.72
TraesCS5A01G301700.1	Wheat	cytosol	61.43	61.63
Zm00001d052653_P003	Maize	cytosol, plastid	63.06	59.94
GSMUA_Achr10P...	Banana	nucleus, plastid	17.98	59.5
HORVU4Hr1G081670.1	Barley	cytosol	62.73	59.26
Zm00001d007421_P004	Maize	cytosol	57.85	56.33
TraesCS1B01G295100.1	Wheat	plasma membrane	41.5	56.08
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	27.3	54.66
Zm00001d007430_P002	Maize	cytosol	48.32	54.26
OQU83587	Sorghum	plastid	62.84	53.75
VIT_02s0025g00510.t01	Wine grape	cytosol	53.74	52.6
HORVU1Hr1G072160.5	Barley	cytosol	52.98	52.3
TraesCS1A01G285700.1	Wheat	cytosol	51.68	51.07
TraesCS1B01G295300.1	Wheat	cytosol	46.91	50.82
Zm00001d007426_P001	Maize	cytosol, plastid	54.6	50.65
HORVU1Hr1G072140.1	Barley	cytosol	50.05	49.73
TraesCS1D01G284800.1	Wheat	plastid	53.09	49.05
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	47.89	48.2
TraesCS1A01G357100.1	Wheat	cytosol	33.69	47.77
VIT_06s0004g03790.t01	Wine grape	nucleus	43.88	47.54
TraesCS1D01G285000.1	Wheat	cytosol	46.05	46.81
HORVU5Hr1G078630.1	Barley	cytosol	48.1	46.01
HORVU0Hr1G013380.4	Barley	plastid	36.08	42.37
TraesCS1D01G284900.1	Wheat	cytosol	50.7	40.34
TraesCS1B01G295200.1	Wheat	cytosol	50.81	38.35
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.13	35.21
VIT_17s0000g09160.t01	Wine grape	plasma membrane	14.19	18.63
VIT_15s0046g01900.t01	Wine grape	plasma membrane	13.33	17.75
VIT_12s0035g02150.t01	Wine grape	plasma membrane	13.54	17.01
VIT_16s0050g00980.t01	Wine grape	plasma membrane	13.0	16.81
VIT_15s0046g01920.t01	Wine grape	plasma membrane	13.54	16.67
VIT_16s0050g00990.t01	Wine grape	plastid	13.65	10.7

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:100257489	wikigene:100257489	Gene3D:2.40.30.10	Gene3D:3.40.50.80
ProteinID:CCB52284	ProteinID:CCB52284.1	ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	UniProt:F6HJ87	InterPro:FAD-bd_8	EMBL:FN595770	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927
EntrezGene:LOC100257489	wikigene:LOC100257489	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF94	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
UniParc:UPI000210823D	ArrayExpress:VIT_01s0150g00450	EnsemblPlantsGene:VIT_01s0150g00450	EnsemblPlants:VIT_01s0150g00450.t01	RefSeq:XP_002268641	RefSeq:XP_002268641.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:22815076..22819209

Molecular Weight (calculated)

104785.0 Da

IEP (calculated)

9.417

GRAVY (calculated)

-0.290

Length

923 amino acids

Sequence
(BLAST)

001: MRIHDNSDTE NVQSDKASYC GPLGGPPDKK RSARESARFN IPPVTSSQLK STSVTPRDDD DYVEITLGVL DDSITVHSVQ APGGAKGEDP QLAQLAKKSL
101: QKKSSYASSI FCTTSSRIKP VSQELKRFPS FSERPPARHF DRTKSAVTHA LKGLKFITTK ASGGATGWPV VEKRFDELTA STNGLLHFSL FCECIGRMDK
201: DSKDFADALF HALARRHNLT GDSIDQAQLK AFWEQISNQG FDSRLQTFFD MMDKNADGRI TEKEVGEIIS LSAAANKLSN IQKQANEYAA FIMEELDPDN
301: VGYIMVQNLE TLLLQEPNQS FSVGDSRILS QLLSQKLKPT QENNPLKRWC HKTKYLVMDN WQRLWVMMLW LGILAGLFTY KFVQYRHKAA YKVMGYCVCT
401: AKGAAETLKF NMALILLPVC RNTITWLRNK TKLGVLVPFD DNLNFHKVIA VAIAIGVALH GGAHLTCDFP KVIHATEEEY KPMEPYFGEE QPTNYWWFLK
501: GVEGMTGIIM VILMAIAFTL ATPWFRRNKL NLPVTLKKLS GFNAFWYSHH LFVIVYVLLI VHGIYLYLTK EWYNKTTWMY IAVPLVLYAC ERLIRSFRST
601: IKPVRILKVA VYPGNVLTLH MTKPQGFKYR SGQYMFVNCS SVSPFEWHPF SLTSAPGDDY LSVHIRTLGD WTRQLKTVFR EVCQPPTGGK SGQLRADCSL
701: ERNGPNFPKI LIDGPYGAPA QDYKKYEVVL LVGLGIGATP MISIVKDIIN NMKAKEEDKE DIQIRVETIP DHDNGDRKKK NKRTFKTKRA YYYWVTREQG
801: SFEWFKGIMN EVAEMDEKGV VELHNYCTSV FEEGDARSAL ITMLQTLYHA KNGVDVVSGT RVKSHFARPN WRQVLKNIAL QHPDSRVGVF YCGAPGLTKE
901: LQKLALYFSH KTTTKFDFHK ENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.