Factsheet for GSMUA_Achr10P17300_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
plasma membrane 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11770_001	Banana	cytosol	69.18	48.01
Bra013862.1-P	Field mustard	cytosol	31.18	33.59
GSMUA_Achr10P...	Banana	cytosol	74.91	22.74
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	67.74	22.66
GSMUA_Achr6P16270_001	Banana	cytosol	65.95	21.37
GSMUA_Achr11P...	Banana	mitochondrion	38.35	20.42
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	67.03	20.24
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	67.74	20.15
Solyc03g117980.2.1	Tomato	nucleus	67.38	20.04
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	57.35	19.18
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	60.57	18.35
VIT_19s0014g02830.t01	Wine grape	cytosol	54.48	18.1
VIT_01s0150g00450.t01	Wine grape	cytosol	59.5	17.98
Bra037520.1-P	Field mustard	cytosol	59.14	17.9
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	58.78	17.81
Solyc06g068680.2.1	Tomato	cytosol	53.76	17.5
KRH63901	Soybean	cytosol, nucleus, plasma membrane	58.06	17.46
KRH54051	Soybean	cytosol, nucleus, plasma membrane	58.42	17.32
Bra011911.1-P	Field mustard	cytosol	39.43	17.08
AT5G07390.1	Thale cress	cytosol	55.2	17.07
Bra029194.1-P	Field mustard	cytosol	55.56	17.03
AT5G51060.1	Thale cress	cytosol	54.84	16.91
KRH41026	Soybean	mitochondrion	53.76	16.89
KRH59706	Soybean	cytosol	53.41	16.59
Bra009266.1-P	Field mustard	cytosol	52.69	16.3
GSMUA_Achr9P05450_001	Banana	mitochondrion	48.75	15.61
GSMUA_Achr6P31850_001	Banana	mitochondrion	48.39	15.13
AT4G25090.1	Thale cress	cytosol	45.88	15.08
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.37	14.53
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.01	14.41
GSMUA_Achr10P...	Banana	cytosol	43.37	14.34
GSMUA_AchrUn_...	Banana	cytosol	22.22	14.16
GSMUA_Achr3P05840_001	Banana	mitochondrion	44.09	13.82
GSMUA_Achr8P23680_001	Banana	mitochondrion	43.73	13.69
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	9.32	12.21
GSMUA_Achr5P29250_001	Banana	cytosol	31.54	12.19
GSMUA_AchrUn_...	Banana	cytosol	3.23	3.95
GSMUA_Achr6P11760_001	Banana	golgi	5.02	3.43
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	3.58	3.39
GSMUA_Achr11P...	Banana	plasma membrane	8.6	3.28
GSMUA_Achr8P12250_001	Banana	plasma membrane	8.24	3.25
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	8.6	3.1
GSMUA_Achr10P...	Banana	plasma membrane	5.38	2.88
GSMUA_Achr8P12270_001	Banana	plasma membrane	7.89	2.42
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	4.3	2.16
GSMUA_Achr8P12260_001	Banana	peroxisome	2.15	1.2
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	0.36	0.44

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr10G17300_001	EnsemblPlants:GSMUA_Achr10P17300_001
EnsemblPlants:GSMUA_Achr10T17300_001	InterPro:IPR002048	UniProt:M0RJ05	InterPro:NADPH_Ox	PFAM:PF08414	PFscan:PS50222
PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	SUPFAM:SSF47473	UniParc:UPI000295EBF7	SEG:seg	:

Description

Respiratory burst oxidase homolog protein C [Source:GMGC_GENE;Acc:GSMUA_Achr10G17300_001]

Coordinates

chr10:+:24594676..24598036

Molecular Weight (calculated)

31002.8 Da

IEP (calculated)

9.130

GRAVY (calculated)

-0.484

Length

279 amino acids

Sequence
(BLAST)

001: MTLNIGTVKH DNPEMSLLAR TLERRSASFG SSVIRTASSR IRQVSQELRQ LASATKRPAV GKFDRSRSAA AHALKGLKFI TKTDGATGWP AVEKRFDELA
101: VDGALHRSVF GQCIGMKEKE FAGELFDAMA RRRNITGDKI TKAELREFWE QIADQSFDSR LQTFFDMVDK NLDGRITEEE VKEIISLSAS ANKLSKIQEQ
201: AEEYARLIME ELDPNELGYI EIYNLEMLLL QAPSQSMRIG TTNSRNLSQL LSQNLSRTRS GGGTSAPSTS WRTTGSGCG

Best Arabidopsis Sequence Match ( AT1G09090.1 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVTIF QE

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.