Factsheet for Solyc06g068680.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11760_001	Banana	golgi	34.42	72.3
GSMUA_Achr10P...	Banana	plasma membrane	42.94	70.63
Solyc03g117980.2.1	Tomato	nucleus	71.88	65.67
Os11t0537400-01	Rice	plasma membrane	3.27	63.64
GSMUA_Achr6P16270_001	Banana	cytosol	62.89	62.6
TraesCS4B01G327800.2	Wheat	cytosol	64.88	60.63
GSMUA_Achr10P...	Banana	cytosol	64.76	60.39
TraesCS4D01G324800.1	Wheat	cytosol	64.64	60.35
TraesCS5A01G499900.1	Wheat	cytosol	64.41	60.07
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	57.64	59.23
Solyc01g099620.2.1	Tomato	cytosol	59.39	58.84
TraesCS5B01G299000.1	Wheat	cytosol	63.01	58.82
TraesCS5D01G306400.1	Wheat	cytosol	62.78	58.67
TraesCS5A01G301700.1	Wheat	cytosol	62.78	58.48
HORVU4Hr1G081670.1	Barley	cytosol	64.64	56.7
Zm00001d052653_P003	Maize	cytosol, plastid	63.36	55.92
GSMUA_Achr6P11770_001	Banana	cytosol	26.02	55.47
TraesCS1B01G295100.1	Wheat	plasma membrane	43.87	55.05
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	29.17	54.23
GSMUA_Achr10P...	Banana	nucleus, plastid	17.5	53.76
Zm00001d007421_P004	Maize	cytosol	59.04	53.38
Solyc05g025680.1.1	Tomato	plasma membrane	38.39	52.72
Zm00001d007430_P002	Maize	cytosol	50.17	52.31
OQU83587	Sorghum	plastid	63.36	50.32
HORVU1Hr1G072160.5	Barley	cytosol	54.49	49.95
TraesCS1A01G285700.1	Wheat	cytosol	54.38	49.89
Solyc08g081690.2.1	Tomato	cytosol	55.78	49.64
Zm00001d007426_P001	Maize	cytosol, plastid	56.94	49.05
TraesCS1B01G295300.1	Wheat	cytosol	48.31	48.59
Solyc07g042460.1.1	Tomato	cytosol	49.59	48.24
Solyc06g075570.1.1	Tomato	cytosol	46.09	47.59
Solyc11g072800.1.1	Tomato	cytosol	45.16	47.43
TraesCS1A01G357100.1	Wheat	cytosol	35.94	47.31
HORVU1Hr1G072140.1	Barley	cytosol	51.23	47.26
TraesCS1D01G284800.1	Wheat	plastid	54.03	46.35
TraesCS1D01G285000.1	Wheat	cytosol	47.84	45.15
HORVU5Hr1G078630.1	Barley	cytosol	48.31	42.9
HORVU0Hr1G013380.4	Barley	plastid	36.06	39.31
TraesCS1D01G284900.1	Wheat	cytosol	52.39	38.71
TraesCS1B01G295200.1	Wheat	cytosol	51.81	36.3
Bra013862.1-P	Field mustard	cytosol	10.97	36.29
CDY34341	Canola	nucleus	10.85	35.91
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.87	35.68
CDY70539	Canola	nucleus	11.55	32.35
Solyc05g025690.1.1	Tomato	mitochondrion	8.52	30.17
Solyc03g112320.2.1	Tomato	plasma membrane	12.95	20.0
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	3.97	17.44
Solyc01g102610.2.1	Tomato	plastid	14.94	17.3
Solyc01g094890.2.1	Tomato	plasma membrane	14.12	16.97
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	13.89	16.55
Solyc06g036220.1.1	Tomato	plasma membrane	8.05	16.43

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	UniProt:K4C842
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466
ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	EnsemblPlantsGene:Solyc06g068680.2	EnsemblPlants:Solyc06g068680.2.1	TMHMM:TMhelix
UniParc:UPI000276658C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:+:42577884..42583368

Molecular Weight (calculated)

97735.0 Da

IEP (calculated)

9.350

GRAVY (calculated)

-0.294

Length

857 amino acids

Sequence
(BLAST)

001: MQNPEDHHSD REIISPSYTT KSNDDKYVEV TLDIRDDTVA VHSVKNATKT KAEEAEIEAL GKNLQKKRSF GATIVRNLSK RLRSQPHPPR TIDRSSTAAQ
101: NVLKGFKFIS RTDGGSGWDT VQQRFDELTA NSDSLLPKAK FGECIGMNKE SEGFALELFD ALARRRNMTS GCISKEQLKE FWEQIANQSF DSRLQTFFDM
201: VDKDADGRLT EEEVREIICL SASANKLSNI QKQAAEYAAL IMEELDRERK GYIMLENLKM LLLQAPIQSD GGKGLHRKLS HMLSMKLKPT LETNPIKRWY
301: NNLTYFLLDN WRRVWVLLLW ISVMAGLFGY KYVQYRNKAA FDVMGHCVCV AKGAAEVLKL NMALILLPVC RNTITWLRNK TKLGGAVPFD DNINFHKMVA
401: GAIGLAVGIH ILAHMTCDFP RLLNASPEKY KPMKPYFGDQ PRNYWHFVKG VEGVSGIIMV VLMSIAFTLA SQRFRRNKIR LPRPLNKLTG FNAFWYSHHL
501: FVIVYSLLIV HGIELYLTKE WYKKTTWMYL AIPIILYSGE RLLRAFRSSV KDVKILKVAM YPGNVLTLQM SKPQGFNYKS GQYMFVNCAA VSPFEWHPFS
601: ITSAPGDEYL SVHIRTVGDW TTKLRDVFSE PSQTGRSGLV KAAYMQDNIN YYPKVLIDGP YGAPAQDYKE YEVLLLVGLG IGATPMISIV KDIVNNMKEE
701: EYDHDLESTE QKKKSGSGSN FKRVYFYWVT REQGSFDWFK GLMNELAEMD CAEIIEMHNY CTSVYEEGDA RSALIAMLQS INHAKNGVDI VSGTRVKTHF
801: ARPNWRDVYK RIALNHTDAR VGVFYCGAPA LTKQLGQLAL DFSHKTSTKF DFHKENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.