Factsheet for Solyc06g036220.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
plasma membrane 4
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074349	Potato	plasma membrane	80.24	45.11
Os04t0578600-01	Rice	golgi, mitochondrion, vacuole	39.52	36.97
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	16.43	35.38
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	23.33	35.13
VIT_16s0050g00980.t01	Wine grape	plasma membrane	58.81	34.59
GSMUA_Achr8P12260_001	Banana	peroxisome	40.95	34.4
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	17.86	32.89
KRH35248	Soybean	plasma membrane	54.76	32.26
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	51.9	30.32
Solyc01g094890.2.1	Tomato	plasma membrane	49.29	29.03
GSMUA_Achr8P12250_001	Banana	plasma membrane	47.14	27.97
TraesCS2B01G414300.1	Wheat	plasma membrane	46.67	27.11
TraesCS2D01G393700.1	Wheat	plasma membrane	46.43	27.01
TraesCS2A01G396000.1	Wheat	plasma membrane	47.14	25.52
GSMUA_Achr8P12270_001	Banana	plasma membrane	48.33	22.31
Solyc03g112320.2.1	Tomato	plasma membrane	28.57	21.62
Solyc01g102610.2.1	Tomato	plastid	27.38	15.54
Solyc05g025680.1.1	Tomato	plasma membrane	14.76	9.94
Solyc06g068680.2.1	Tomato	cytosol	16.43	8.05
Solyc08g081690.2.1	Tomato	cytosol	17.86	7.79
Solyc01g099620.2.1	Tomato	cytosol	15.95	7.75
Solyc03g117980.2.1	Tomato	nucleus	17.14	7.68
Solyc06g075570.1.1	Tomato	cytosol	15.0	7.59
Solyc11g072800.1.1	Tomato	cytosol	14.52	7.48
Solyc07g042460.1.1	Tomato	cytosol	15.48	7.38
Solyc05g025690.1.1	Tomato	mitochondrion	0.0	0.0

Protein Annotations

MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927
UniProt:K4C4Z0	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PRINTS:PR00466	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF79	SUPFAM:SSF52343	EnsemblPlantsGene:Solyc06g036220.1	EnsemblPlants:Solyc06g036220.1.1	TMHMM:TMhelix
UniParc:UPI0002765F53	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:-:25688216..25690397

Molecular Weight (calculated)

47333.1 Da

IEP (calculated)

8.387

GRAVY (calculated)

0.313

Length

420 amino acids

Sequence
(BLAST)

001: MKEFFSTRTT ISLSFADMRE MTFHLGSSIL RLFGLTSESS VKYHIWLGNA VMALFTAHGL CFIIFWADTH QLEYENRAIM EWNKVGISIV TGEVSLFAGI
101: AMWMTSFLRV FHVGFIYSCI TPPGFYLFLI DWYLRFLQSL QCVSLVSARV LPCQAVELNF SKSPGIRYNP TSSVFINVPS ILKLQWHPFT VTSNSNMEPE
201: KLSIVIKSEG KWSQKLFEKL SSTTPGHHLQ VSIEGPYGPS STQFLRHDML IMVSGGSGIT PFISIIRELI YIAGSTSCKI PKVLLVAAFK KSTNLAMLEL
301: LLPLSGTNYN ILRLQIQTEA YVTRETEPLK DNQKFLKTLW LKPNASERPV SAVLGQNNWL CLVAIIISSS LMFLLLIEIV TECEESIFVS GPRRMKQEIA
401: IICSASVATN LHFESISFSW

Best Arabidopsis Sequence Match ( AT1G01590.1 )
(BLAST)

001: MGVGEMNKEV IDKVIKFLMM VILMGTIVIW IMMPTSTYKE IWLTSMRAKL GKSIYYGRPG VNLLVYMFPM ILLAFLGCIY LHLKKSTTVN QFNSGVEKKR
101: AKFGALRRPM LVNGPLGIVT VTEVMFLTMF MALLLWSLAN YMYRTFVNVT SESAATDGNN LWQARLDLIA VRIGIVGNIC LAFLFYPVAR GSSLLAAVGL
201: TSESSIKYHI WLGHLVMIIF TSHGLCYFIY WISKNQLVSK MLEWDRTAVS NLAGEIALVA GLMMWVTTYP KIRRRLFEVF FYSHYLYIVF MLFFVFHVGI
301: SHALIPLPGF YIFLVDRFLR FLQSRNNVKL VSARVLPCDT VELNFSKNPM LMYSPTSTMF VNIPSISKLQ WHPFTIISSS KLEPETLSVM IKSQGKWSTK
401: LYDMLSSSSS DQINRLAVSV EGPYGPSSTD FLRHESLVMV SGGSGITPFI SIVRDLFYMS STHKCKIPKM TLICAFKNSS DLSMLDLILP TSGLTTDMAS
501: FVDIQIKAFV TREEKTSVKE STHNRNIIKT RHFKPNVSDQ PISPILGPNS WLCLAAILSS SFMIFIVIIA IITRYHIHPI DQNSEKYTWA YKSLIYLVSI
601: SITVVTTSTA AMLWNKKKYY AKNDQYVDNL SPVIIESSPQ QLISQSTDIH YGERPNLNKL LVGLKGSSVG ILVCGPKKMR QKVAKICSFG SAENLHFESI
701: SFSW

Arabidopsis Description

FRO1Probable ferric reduction oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMM2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.