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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
TargetP:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g094900.1.1 Tomato cytosol, mitochondrion, plasma membrane, plastid 29.03 41.54
Os04t0578600-01 Rice golgi, mitochondrion, vacuole 59.5 36.97
CDX68510 Canola extracellular, mitochondrion, plasma membrane, plastid 14.7 32.28
TraesCS2D01G393700.1 Wheat plasma membrane 72.04 27.84
TraesCS2B01G414300.1 Wheat plasma membrane 71.33 27.52
TraesCS2A01G396000.1 Wheat plasma membrane 73.12 26.29
Bra009719.1-P Field mustard golgi, plasma membrane 41.94 23.64
Solyc06g036220.1.1 Tomato plasma membrane 35.13 23.33
GSMUA_Achr8P12250_001 Banana plasma membrane 51.25 20.2
GSMUA_Achr8P12260_001 Banana peroxisome 34.77 19.4
KRH48086 Soybean plasma membrane 49.1 19.08
VIT_16s0050g00980.t01 Wine grape plasma membrane 48.75 19.05
KRH06603 Soybean plasma membrane 47.67 18.52
KRH00822 Soybean plasma membrane 47.31 18.41
KRH35248 Soybean plasma membrane 45.16 17.67
Solyc01g094910.2.1 Tomato peroxisome, plasma membrane, plastid 45.52 17.66
PGSC0003DMT400026254 Potato plasma membrane 44.44 17.59
CDX88061 Canola plasma membrane 41.58 17.52
KRH35246 Soybean plasma membrane 44.09 17.52
VIT_15s0046g01900.t01 Wine grape plasma membrane 43.37 17.46
PGSC0003DMT400074349 Potato plasma membrane 46.59 17.4
PGSC0003DMT400024558 Potato plasma membrane, vacuole 44.09 17.4
Solyc01g094890.2.1 Tomato plasma membrane 44.44 17.39
PGSC0003DMT400000536 Potato plastid 44.8 17.34
CDY46972 Canola plasma membrane, vacuole 42.29 16.91
AT5G23980.1 Thale cress plasma membrane 42.29 16.88
AT5G23990.2 Thale cress endoplasmic reticulum, plasma membrane 42.29 16.88
CDY44266 Canola plasma membrane, vacuole 41.94 16.76
Bra029389.1-P Field mustard plasma membrane 41.94 16.76
VIT_15s0046g01920.t01 Wine grape plasma membrane 43.37 16.13
HORVU2Hr1G077650.1 Barley peroxisome, plastid 36.2 13.59
VIT_16s0050g00990.t01 Wine grape plastid 48.39 11.46
HORVU1Hr1G091930.1 Barley peroxisome, plasma membrane 15.05 9.11
HORVU3Hr1G087210.4 Barley peroxisome, plastid 22.22 7.16
HORVU5Hr1G024550.3 Barley cytosol 21.86 7.1
HORVU4Hr1G086500.1 Barley cytosol 19.71 6.51
HORVU1Hr1G081950.8 Barley plastid 22.58 6.48
HORVU3Hr1G069780.1 Barley mitochondrion 21.51 6.4
HORVU4Hr1G081670.1 Barley cytosol 21.15 6.04
HORVU5Hr1G078630.1 Barley cytosol 20.79 6.01
HORVU1Hr1G071340.13 Barley mitochondrion, peroxisome, plastid 21.51 5.93
HORVU1Hr1G072160.5 Barley cytosol 19.35 5.78
HORVU5Hr1G062490.8 Barley plasma membrane 20.43 5.78
HORVU1Hr1G072140.1 Barley cytosol 18.28 5.49
HORVU6Hr1G035970.2 Barley mitochondrion 16.85 4.9
CDY68445 Canola plastid 8.6 4.55
HORVU0Hr1G013380.4 Barley plastid 12.19 4.33
HORVU3Hr1G037600.3 Barley cytosol, peroxisome, plastid 3.94 2.4
GSMUA_Achr8P12300_001 Banana extracellular, peroxisome, plastid 0.0 0.0
HORVU3Hr1G069690.1 Barley mitochondrion 0.0 0.0
Protein Annotations
MapMan:25.4.2.1MapMan:25.5.2.1UniProt:A0A287IZQ4InterPro:Cyt_b245_heavy_chainInterPro:FAD-bd_8InterPro:Fe3_Rdtase_TM_dom
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:HORVU2Hr1G094150EnsemblPlants:HORVU2Hr1G094150.3PFAM:PF01794
PFAM:PF08022PRINTS:PR00466PANTHER:PTHR11972PANTHER:PTHR11972:SF41SignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI000B47B467SEG:seg::::
Description
No Description!
Coordinates
chrchr2H:-:663384898..663385737
Molecular Weight (calculated)
31724.2 Da
IEP (calculated)
11.028
GRAVY (calculated)
0.243
Length
279 amino acids
Sequence
(BLAST)
001: RRLGTVGSLC CALLFLPVAR GSALLPLVGL TSESSIKYHV WLGNMAMVFF TAHGFCYVFF WASTDQIHLV RTPLRWQYNQ VFKIQSKLRT NLACMPGQPL
101: IQMTKWARTR VSNVAGELAL LCGLAMWATA LPRIRRRMFE LFYYAHHLYV PFIVFSALHM GVTVFCFVLP GVFLFAVDRC LRFLRSRARV RLVSSRLLPS
201: GAVELNFAKS PCKQDGYMQG RLRGNDRKKR VRTDNFVSGL RYNPTSTLFI NVPCVSRLQW HPFSVTSSSS LEPDTLSVV
Best Arabidopsis Sequence Match ( AT1G01590.1 )
(BLAST)
001: MGVGEMNKEV IDKVIKFLMM VILMGTIVIW IMMPTSTYKE IWLTSMRAKL GKSIYYGRPG VNLLVYMFPM ILLAFLGCIY LHLKKSTTVN QFNSGVEKKR
101: AKFGALRRPM LVNGPLGIVT VTEVMFLTMF MALLLWSLAN YMYRTFVNVT SESAATDGNN LWQARLDLIA VRIGIVGNIC LAFLFYPVAR GSSLLAAVGL
201: TSESSIKYHI WLGHLVMIIF TSHGLCYFIY WISKNQLVSK MLEWDRTAVS NLAGEIALVA GLMMWVTTYP KIRRRLFEVF FYSHYLYIVF MLFFVFHVGI
301: SHALIPLPGF YIFLVDRFLR FLQSRNNVKL VSARVLPCDT VELNFSKNPM LMYSPTSTMF VNIPSISKLQ WHPFTIISSS KLEPETLSVM IKSQGKWSTK
401: LYDMLSSSSS DQINRLAVSV EGPYGPSSTD FLRHESLVMV SGGSGITPFI SIVRDLFYMS STHKCKIPKM TLICAFKNSS DLSMLDLILP TSGLTTDMAS
501: FVDIQIKAFV TREEKTSVKE STHNRNIIKT RHFKPNVSDQ PISPILGPNS WLCLAAILSS SFMIFIVIIA IITRYHIHPI DQNSEKYTWA YKSLIYLVSI
601: SITVVTTSTA AMLWNKKKYY AKNDQYVDNL SPVIIESSPQ QLISQSTDIH YGERPNLNKL LVGLKGSSVG ILVCGPKKMR QKVAKICSFG SAENLHFESI
701: SFSW
Arabidopsis Description
FRO1Probable ferric reduction oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMM2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.