Factsheet for VIT_15s0046g01900.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g01920.t01	Wine grape	plasma membrane	91.2	84.27
KRH48086	Soybean	plasma membrane	64.07	61.84
VIT_16s0050g00980.t01	Wine grape	plasma membrane	63.2	61.34
PGSC0003DMT400000536	Potato	plastid	62.77	60.33
KRH00822	Soybean	plasma membrane	61.76	59.69
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	61.9	59.67
KRH06603	Soybean	plasma membrane	61.62	59.47
GSMUA_Achr8P12260_001	Banana	peroxisome	41.13	57.0
Solyc01g094890.2.1	Tomato	plasma membrane	58.01	56.38
GSMUA_Achr8P12250_001	Banana	plasma membrane	56.85	55.65
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	15.44	54.87
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	16.74	50.88
TraesCS2B01G414300.1	Wheat	plasma membrane	50.36	48.27
TraesCS2D01G393700.1	Wheat	plasma membrane	49.64	47.65
Os04t0578600-01	Rice	golgi, mitochondrion, vacuole	30.16	46.55
TraesCS2A01G396000.1	Wheat	plasma membrane	49.93	44.59
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	17.46	43.37
GSMUA_Achr8P12270_001	Banana	plasma membrane	55.56	42.31
VIT_16s0050g00990.t01	Wine grape	plastid	57.58	33.87
VIT_17s0000g09160.t01	Wine grape	plasma membrane	31.6	31.15
VIT_12s0035g02150.t01	Wine grape	plasma membrane	32.47	30.61
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	5.92	19.25
VIT_14s0060g02320.t01	Wine grape	cytosol	18.9	14.65
VIT_06s0004g03790.t01	Wine grape	nucleus	17.6	14.32
VIT_02s0025g00510.t01	Wine grape	cytosol	19.48	14.32
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	18.18	13.74
VIT_01s0150g00450.t01	Wine grape	cytosol	17.75	13.33
VIT_19s0014g02830.t01	Wine grape	cytosol	15.87	13.1
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	17.17	12.88

Protein Annotations

EntrezGene:100246548	wikigene:100246548	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	ProteinID:CBI40432
ProteinID:CBI40432.3	UniProt:D7UCG7	InterPro:FAD-bd_8	EMBL:FN596755	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927	EntrezGene:LOC100246548
wikigene:LOC100246548	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF41	SUPFAM:SSF52343	TIGR:TC66622	TMHMM:TMhelix	UniParc:UPI0001BE555A	ArrayExpress:VIT_15s0046g01900
EnsemblPlantsGene:VIT_15s0046g01900	EnsemblPlants:VIT_15s0046g01900.t01	unigene:Vvi.25594	RefSeq:XP_002275993	RefSeq:XP_002275993.1	SEG:seg

Description

No Description!

Coordinates

chr15:-:18731177..18735110

Molecular Weight (calculated)

77433.4 Da

IEP (calculated)

9.833

GRAVY (calculated)

0.306

Length

693 amino acids

Sequence
(BLAST)

001: MRPLLLVIFL GCLVLWVMMP TNTYRGKWLL QLRAKTDSTY FGQQGTTMLI YTFPVLFAAV LGCVYLHLGK KLNDNKSISS PKEDRLTVWK KPALVKGPLG
101: IVSMTELLFF VMFIALLVWS FWEYLHNGFQ GIEATAAKKG EKLWVSKLGA AALRLGLTGN IVLAFLFFPV ARGSSILPLF GLTSEGSIKY HIWLGHICLA
201: LFTSHGVCYI IRWIAKHNLL NQIREWDRTG VSILAGEISL VGGLVMWVTT FPRIRRKKFE LFFYTHYLYI IFMLFFILHV GITYAFISLP SFYLFLVDRY
301: LRFLQSQRKV RLISARVLPC ETVELNFSKT PGLQYSPMSI LFVNLPSVSK LQWHPFTVTS NSNLEQDKLS VTIKGDGSWS KKLYQMLSSS SSVDHLEASI
401: EGPYGPVSTN FIGHDTLVMV SGGSGITPFI SVIRELIFSS SVLKIKTPKI LLISSFKSSS DLTMLDLILP LSGAPLVLSS LQLQVEAYVT REKEPATENV
501: KPLQALWFKP KATDAPASAI LGPNSWLCLG AIISSSFVIF LVLMGLLTRY YIYPIDHNTG LDYPTSAQAA FNILLMCVSI ALAASGAVLW NKKQNTMEAR
601: QVQNMEASSA YGSPASFYNS DKELESLPRQ SLIQSTKVHY GERPDLKRIL FECKGKSVGV LASGPKKMRH EVATICSSGL ADNLHFESIS FSW

Best Arabidopsis Sequence Match ( AT1G01580.2 )
(BLAST)

001: MKENKKQDPW GRVTCMEHAT SLLHPIPTQN SLFIYTLSLP LLPSKQANSI LLTKAIVPIL ISLASERERD RNPERKERME IEKSNNGGSN PSAGEEFKDM
101: IKGVTKFLMM VIFLGTIMLW IMMPTLTYRT KWLPHLRIKF GTSTYFGATG TTLFMYMFPM MVVACLGCVY LHFKNRKSPH HIDRETKGGV WSKLRKPMLV
201: KGPLGIVSVT EITFLAMFVA LLLWCFITYL RNSFATITPK SAAAHDESLW QAKLESAALR LGLIGNICLA FLFLPVARGS SLLPAMGLTS ESSIKYHIWL
301: GHMVMALFTV HGLCYIIYWA SMHEISQMIM WDTKGVSNLA GEIALAAGLV MWATTYPKIR RRFFEVFFYT HYLYIVFMLF FVLHVGISFS FIALPGFYIF
401: LVDRFLRFLQ SRENVRLLAA RILPSDTMEL TFSKNSKLVY SPTSIMFVNI PSISKLQWHP FTITSSSKLE PEKLSIVIKK EGKWSTKLHQ RLSSSDQIDR
501: LAVSVEGPYG PASADFLRHE ALVMVCGGSG ITPFISVIRD LIATSQKETC KIPKITLICA FKKSSEISML DLVLPLSGLE TELSSDINIK IEAFITRDND
601: AGDEAKAGKI KTLWFKPSLS DQSISSILGP NSWLWLGAIL ASSFLIFMII IGIITRYYIY PIDHNTNKIY SLTSKTIIYI LVISVSIMAT CSAAMLWNKK
701: KYGKVESKQV QNVDRPSPTS SPTSSWGYNS LREIESTPQE SLVQRTNLHF GERPNLKKLL LDVEGSSVGV LVCGPKKMRQ KVAEICSSGL AENLHFESIS
801: FSW

Arabidopsis Description

FRO2ferric reduction oxidase 2 [Source:TAIR;Acc:AT1G01580]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.