Factsheet for VIT_19s0014g02830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11760_001	Banana	golgi	31.9	65.69
GSMUA_Achr10P...	Banana	plasma membrane	40.71	65.64
Os11t0537400-01	Rice	plasma membrane	3.21	61.36
KRH63901	Soybean	cytosol, nucleus, plasma membrane	66.43	60.13
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	65.83	59.85
KRH54051	Soybean	cytosol, nucleus, plasma membrane	66.31	59.19
KRH41026	Soybean	mitochondrion	62.14	58.78
CDX92671	Canola	cytosol	52.62	58.47
KRH59706	Soybean	cytosol	62.26	58.24
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	57.5	57.91
VIT_01s0150g00450.t01	Wine grape	cytosol	63.57	57.85
GSMUA_Achr6P16270_001	Banana	cytosol	58.45	57.03
AT5G51060.1	Thale cress	cytosol	61.19	56.8
TraesCS4B01G327800.2	Wheat	cytosol	61.55	56.38
Bra029194.1-P	Field mustard	cytosol	61.07	56.37
CDY38845	Canola	cytosol, peroxisome, plasma membrane	61.07	56.37
CDY32647	Canola	cytosol, peroxisome, plasma membrane	61.07	56.37
TraesCS4D01G324800.1	Wheat	cytosol	61.31	56.1
AT4G25090.1	Thale cress	cytosol	56.67	56.07
TraesCS5A01G499900.1	Wheat	cytosol	61.19	55.93
CDX70035	Canola	cytosol	58.81	55.76
GSMUA_Achr10P...	Banana	cytosol	60.83	55.6
CDX92674	Canola	mitochondrion	22.98	55.46
CDY11053	Canola	cytosol, nucleus, plasma membrane	54.76	55.22
VIT_14s0060g02320.t01	Wine grape	cytosol	58.69	55.15
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.64	55.1
AT5G07390.1	Thale cress	cytosol	59.17	55.1
GSMUA_Achr6P11770_001	Banana	cytosol	26.19	54.73
TraesCS5B01G299000.1	Wheat	cytosol	59.76	54.68
Bra009266.1-P	Field mustard	cytosol	58.69	54.66
TraesCS5D01G306400.1	Wheat	cytosol	59.64	54.63
TraesCS5A01G301700.1	Wheat	cytosol	59.76	54.57
GSMUA_Achr10P...	Banana	nucleus, plastid	18.1	54.48
CDX98976	Canola	cytosol	57.86	53.52
CDX81049	Canola	cytosol	54.52	53.44
Zm00001d052653_P003	Maize	cytosol, plastid	61.55	53.24
TraesCS1B01G295100.1	Wheat	plasma membrane	42.86	52.71
HORVU4Hr1G081670.1	Barley	cytosol	61.19	52.61
CDX81047	Canola	cytosol	52.98	52.23
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.79	52.22
Zm00001d007421_P004	Maize	cytosol	58.45	51.79
CDX78290	Canola	cytosol	52.38	51.52
Zm00001d007430_P002	Maize	cytosol	50.24	51.34
CDY26109	Canola	mitochondrion	35.83	51.02
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	27.86	50.76
CDY11054	Canola	cytosol, nucleus, plasma membrane	49.29	50.74
CDY08237	Canola	cytosol, peroxisome, plasma membrane	31.9	50.38
HORVU1Hr1G072160.5	Barley	cytosol	55.0	49.41
TraesCS1A01G285700.1	Wheat	cytosol	53.81	48.39
OQU83587	Sorghum	plastid	62.14	48.38
CDX92675	Canola	cytosol	22.14	48.19
Zm00001d007426_P001	Maize	cytosol, plastid	57.02	48.14
HORVU1Hr1G072140.1	Barley	cytosol	52.74	47.69
TraesCS1B01G295300.1	Wheat	cytosol	47.98	47.3
VIT_02s0025g00510.t01	Wine grape	cytosol	52.86	47.08
TraesCS1D01G284800.1	Wheat	plastid	54.29	45.65
Bra011911.1-P	Field mustard	cytosol	34.76	45.34
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	48.93	44.82
VIT_06s0004g03790.t01	Wine grape	nucleus	45.36	44.72
TraesCS1A01G357100.1	Wheat	cytosol	34.17	44.09
TraesCS1D01G285000.1	Wheat	cytosol	47.5	43.94
HORVU5Hr1G078630.1	Barley	cytosol	46.79	40.73
HORVU0Hr1G013380.4	Barley	plastid	36.07	38.55
TraesCS1D01G284900.1	Wheat	cytosol	53.1	38.45
TraesCS1B01G295200.1	Wheat	cytosol	52.5	36.06
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.93	35.21
VIT_17s0000g09160.t01	Wine grape	plasma membrane	15.12	18.07
VIT_12s0035g02150.t01	Wine grape	plasma membrane	14.52	16.6
VIT_16s0050g00980.t01	Wine grape	plasma membrane	13.93	16.39
VIT_15s0046g01900.t01	Wine grape	plasma membrane	13.1	15.87
VIT_15s0046g01920.t01	Wine grape	plasma membrane	13.57	15.2
VIT_16s0050g00990.t01	Wine grape	plastid	14.05	10.02

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:100252158	wikigene:100252158	Gene3D:2.40.30.10	Gene3D:3.40.50.80
ProteinID:CBI20311	ProteinID:CBI20311.3	UniProt:E0CSL2	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
InterPro:FAD-bd_8	EMBL:FN595229	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664
GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	EntrezGene:LOC100252158	wikigene:LOC100252158
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0001BE1CB9	ArrayExpress:VIT_19s0014g02830
EnsemblPlantsGene:VIT_19s0014g02830	EnsemblPlants:VIT_19s0014g02830.t01	unigene:Vvi.21460	RefSeq:XP_002282296	RefSeq:XP_002282296.2	RefSeq:XP_010644201.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr19:-:2924616..2929554

Molecular Weight (calculated)

95408.0 Da

IEP (calculated)

6.940

GRAVY (calculated)

-0.301

Length

840 amino acids

Sequence
(BLAST)

001: MEVQKMKTDD HVSDDIKLDV PDDSDAVHGV KTTGEDAQSA LHAEGEENRF SFRALVRGAS ARIRSVSDEL KSLTSWKSTP SSRYEPPNSA ALHALTGLKF
101: IRQTDGSAGW PDVEKSFQQL TDSTNGLLPR SRFAECIGMG QESNEFGGKL FDALARRWEI KDDSINKAQL KQFWDQISDE SFYSRLQTFF DMVDKDADGR
201: ITEEEVKEII TLSASTNNLS NIQKQADEYA ALIMEALDPK NVGYVQVHKL EMVLLEASKQ TTRGDSKNLS QLLSEQLRRP ALENNPLIRC CQGTKYLLKD
301: NWRRVWIIAL WVGVMLGLFA YKFVQYRNRA AYQVMGHCVC MAKGAAETLK LNMALILLPV CRNTMTWLRN KTKLSVIVPF DDNLNFHMVV AVGVAVGTGI
401: HVVYHMACDF PRLIHASSDR FALLEPYFKE QPSYWELVKG VEGVTGILMV VLMVIAFTLA TPWLRRGKLT GFNAFWYSHH LFVIVYALLV VHGLYLYLSK
501: EWYQKTTWMY LAVPVVLYAL ERLTRAFRSS IQPVWIVKAV DYPGRRGVLA LHMQKPDKDF EYRSGQYMFV NCPAVSPFEW HPFSITSAPR DDYLSVHIQA
601: VGDWTRQIKK VFSEASPSGK GGYSEGENRP NFPKVLIDGP YGAPAQEYKN YEVVMLVGLG IGATPMISIV KDILHNIKEM EEEENADMEG GNGAGGKYDN
701: EFKTRRAYFY WMTREQDSFH WFEGVMDEVA ELDHNEVIEL HNHCTSVHEE GDARSALIAM IQDLNHAKKG YDVVSGTRVK SHFGKPNWRS VFKYIARKNP
801: HTNVGVFYCG PPGPTKQLRE LALGFSHETS TQFDFHKENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.