CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	99.76	99.76
CDX92671	Canola	cytosol	85.83	94.58
CDX92674	Canola	mitochondrion	35.53	85.06
CDY11054	Canola	cytosol, nucleus, plasma membrane	81.27	82.97
CDX92675	Canola	cytosol	37.82	81.61
AT4G25090.1	Thale cress	cytosol	73.59	72.2
CDY32647	Canola	cytosol, peroxisome, plasma membrane	69.75	63.85
CDY38845	Canola	cytosol, peroxisome, plasma membrane	69.63	63.74
CDY26109	Canola	mitochondrion	42.26	59.66
CDY08237	Canola	cytosol, peroxisome, plasma membrane	37.82	59.21
CDY22644	Canola	plasma membrane	40.34	58.33
CDY65632	Canola	nucleus, peroxisome	9.6	55.56
VIT_19s0014g02830.t01	Wine grape	cytosol	55.22	54.76
CDX70035	Canola	cytosol	57.26	53.84
CDY35764	Canola	cytosol, nucleus, plasma membrane	57.86	53.62
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	58.94	53.31
CDX81047	Canola	cytosol	54.5	53.29
CDX86335	Canola	cytosol, nucleus, plasma membrane	58.58	52.93
CDX85316	Canola	cytosol, nucleus, plasma membrane	58.46	52.82
CDX98976	Canola	cytosol	57.26	52.53
CDX81049	Canola	cytosol	53.9	52.39
CDX78290	Canola	cytosol	53.66	52.34
KRH63901	Soybean	cytosol, nucleus, plasma membrane	58.22	52.26
KRH41026	Soybean	mitochondrion	55.7	52.25
KRH59706	Soybean	cytosol	55.58	51.56
KRH54051	Soybean	cytosol, nucleus, plasma membrane	57.62	51.01
CDY06348	Canola	cytosol	48.98	50.0
CDX86059	Canola	peroxisome, plasma membrane, plastid	21.25	45.27
CDY08347	Canola	mitochondrion	49.46	43.64
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	47.54	42.4
CDY38202	Canola	mitochondrion	47.3	41.78
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	46.58	41.54
CDY09233	Canola	cytosol	43.22	40.72
CDY63433	Canola	cytosol	45.5	40.02
CDY25278	Canola	cytosol, peroxisome, plasma membrane	44.78	39.98
CDY41031	Canola	cytosol, peroxisome, plasma membrane	47.54	38.94
CDY26689	Canola	cytosol, peroxisome, plasma membrane	46.1	37.76
CDX99140	Canola	cytosol, peroxisome, plasma membrane	36.73	36.26
CDY34341	Canola	nucleus	10.8	34.75
CDY70539	Canola	nucleus	11.28	30.72
CDX86058	Canola	cytosol	12.24	29.48
CDY22645	Canola	cytosol	6.84	25.22
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	3.48	22.83
CDX88061	Canola	plasma membrane	15.01	18.88
CDY38013	Canola	golgi, plasma membrane	11.16	18.86
CDY69826	Canola	cytosol, plastid, vacuole	8.04	18.77
CDY44266	Canola	plasma membrane, vacuole	15.25	18.19
CDY46972	Canola	plasma membrane, vacuole	15.13	18.05
CDX90043	Canola	golgi, plasma membrane	12.24	17.56
CDY38014	Canola	plasma membrane	13.81	16.31
CDY12264	Canola	plasma membrane	13.81	16.29
CDY22585	Canola	plasma membrane	13.93	16.0
CDY65711	Canola	plasma membrane	14.17	15.95
CDX71600	Canola	plasma membrane	14.17	15.92
CDY07230	Canola	plasma membrane	13.33	15.63
CDY68445	Canola	plastid	8.88	14.02
CDY38012	Canola	plasma membrane	3.6	9.9

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078FG99
UniProt:A0A078FG99	EnsemblPlants:CDY11053	ProteinID:CDY11053	ProteinID:CDY11053.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00049011001	InterPro:IPR002048	InterPro:IPR017927
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PFAM:PF13405
PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EE3502

Description

BnaA03g47120DBnaA03g47120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FG99]

Coordinates

chrLK032008:-:825653..830922

Molecular Weight (calculated)

95645.8 Da

IEP (calculated)

9.571

GRAVY (calculated)

-0.294

Length

833 amino acids

Sequence
(BLAST)

001: MTSDTEEKNS SDIVPLSGSF RSTDHNPVME NAGDTDGSSV RDKREKKRNG LVNQIKRFAG KPARLNRSKS TTGQALKGLM FISKSDGGDG WTAVEERFET
101: ITKTTEGLLI RSKFGECIGM KSKDFALVLF DALARRKNMT GDVIDKEILK EFWEQISDQN FDSRLMIFFD MMDKDGDGRL TEDEVKQVIN LSSSTNNLSA
201: IQKKADEYAA MIMEELDPNN IGYIMVESLK NLLMKAETET LAEITSSQDP KQLIEKLKHT PDPNPLRRWY RGLRFFVLDS WQRFWVIALW LSIMTILFTY
301: KYIQYKNRAV YEVLGHCVCF AKGSAETLKL NMALILLPVC RNTITWLRNK TRVGVLVPFD DNINFHKVIA VGITIGVSIH SIAHLACDFP RLIAATPEEY
401: KPLGKYFGEE QPKRYSQFVK STEGITGLVM VFLMAIAFTL ALPWFRRGKL EKTLPGPLKK LASFNAFWYT HHFFIVVYIL LIVHGYYLYL SKEWYKKTTW
501: MYLAVPIALY ACERLKRAFR SSIRTVKVVN AAVYPGNVLT LKMSRPKHFK YKSGQYMFIN CPKVSPFEWH PFSITSAPQD DYLSLHIKVN GDWTKAIKGV
601: FSEVISKPLP VKDTSHGAHN PDYPKIMIDG PYGAPAQDYK KYEVVLLVGL GIGATPMISI IKDIINNMYA MENAQLHQME NGLQREPQDK NENFKTRRAY
701: FYWVTREQGS YDWFKNIMNE IAERDVNKII ELHNYCTSVF EKDDARSALI RMLQSIAYAK SGKDIVSETR VKSHFAKPNW EEVYNKIAMD HPDGTNVGVF
801: YCGSPVLTKE LRRLALEFTQ KTKIRFSFHK ENF

Best Arabidopsis Sequence Match ( AT4G25090.1 )
(BLAST)

001: MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK
101: TDGNAAWTVV EKRYLKITAN TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR LITFFDLMDK DSDGRLTEDE
201: VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS
301: WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH
401: SVSHLACDFP LLIAATPAEY MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK LASFNAFWYT HHLFVIVYIL
501: LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD
601: DYLSVHIKAL GDWTEAIQGV FSEVSKPPPV GDMLNGANSP RFPKIMIDGP YGAPAQDYKK YEVVLLIGLG IGATPMISII KDIINNTETK EQLSQMEKGS
701: PQEQQGNKET FKTRRAYFYW VTKEQGTFDW FKNIMNEIAE RDKSKVIELH NHCTSVYEEG DVRSALIRML QSLNYAKNGL DIVAGTRVMS HFARPNWKNV
801: YKQIAMDHPG ANVGVFYCGA PVLTKELRQL ALEFTHKTST RFSFHKENF

Arabidopsis Description

RBOHGPutative respiratory burst oxidase homolog protein G [Source:UniProtKB/Swiss-Prot;Acc:Q9SW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.