Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26689 | Canola | cytosol, peroxisome, plasma membrane | 91.45 | 91.45 |
| CDY21676 | Canola | cytosol, peroxisome, plasma membrane, plastid | 83.58 | 91.01 |
| CDX81920 | Canola | cytosol, nucleus, plasma membrane, plastid | 82.3 | 89.61 |
| Bra025721.1-P | Field mustard | cytosol, nucleus, peroxisome | 89.68 | 88.12 |
| AT1G19230.2 | Thale cress | cytosol, peroxisome, plasma membrane | 81.91 | 87.5 |
| Solyc05g025680.1.1 | Tomato | plasma membrane | 42.08 | 68.59 |
| VIT_11s0016g00540.t01 | Wine grape | cytosol, peroxisome, plastid | 60.08 | 66.63 |
| Solyc07g042460.1.1 | Tomato | cytosol | 57.13 | 65.95 |
| PGSC0003DMT400035268 | Potato | mitochondrion | 59.98 | 64.89 |
| PGSC0003DMT400066027 | Potato | peroxisome | 28.91 | 64.19 |
| KRH37549 | Soybean | cytosol | 57.72 | 63.25 |
| KRH12608 | Soybean | cytosol | 57.82 | 62.82 |
| GSMUA_Achr3P05840_001 | Banana | mitochondrion | 53.49 | 61.12 |
| GSMUA_Achr8P23680_001 | Banana | mitochondrion | 53.39 | 60.94 |
| TraesCS5B01G212100.1 | Wheat | mitochondrion | 55.95 | 57.77 |
| TraesCS5D01G222100.1 | Wheat | mitochondrion | 55.85 | 57.14 |
| TraesCS5A01G211800.1 | Wheat | cytosol, mitochondrion, peroxisome, plasma membrane | 55.56 | 57.13 |
| HORVU5Hr1G062490.8 | Barley | plasma membrane | 55.36 | 57.04 |
| Os09t0438000-01 | Rice | mitochondrion | 56.34 | 56.9 |
| KXG35704 | Sorghum | mitochondrion | 56.15 | 56.7 |
| CDY65632 | Canola | nucleus, peroxisome | 7.96 | 56.25 |
| Zm00001d032079_P001 | Maize | mitochondrion | 53.88 | 56.15 |
| TraesCS6D01G164500.1 | Wheat | mitochondrion, plasma membrane | 52.31 | 56.0 |
| TraesCS6A01G180600.1 | Wheat | mitochondrion | 52.51 | 55.86 |
| TraesCS6B01G205000.1 | Wheat | mitochondrion | 52.51 | 55.8 |
| KXG25273 | Sorghum | mitochondrion | 54.67 | 55.16 |
| CDY22644 | Canola | plasma membrane | 30.58 | 53.99 |
| HORVU6Hr1G035970.2 | Barley | mitochondrion | 50.25 | 53.28 |
| CDY08347 | Canola | mitochondrion | 48.48 | 52.22 |
| CDX92671 | Canola | cytosol | 36.97 | 49.74 |
| CDY38202 | Canola | mitochondrion | 45.82 | 49.42 |
| Zm00001d020609_P001 | Maize | mitochondrion | 34.22 | 49.08 |
| CDY06348 | Canola | cytosol | 38.45 | 47.92 |
| CDY11053 | Canola | cytosol, nucleus, plasma membrane | 38.94 | 47.54 |
| Solyc05g025690.1.1 | Tomato | mitochondrion | 11.31 | 47.52 |
| CDY35764 | Canola | cytosol, nucleus, plasma membrane | 41.79 | 47.27 |
| CDX92675 | Canola | cytosol | 17.8 | 46.89 |
| CDY08237 | Canola | cytosol, peroxisome, plasma membrane | 24.48 | 46.8 |
| CDX81047 | Canola | cytosol | 39.13 | 46.71 |
| CDY32647 | Canola | cytosol, peroxisome, plasma membrane | 41.69 | 46.59 |
| CDY38845 | Canola | cytosol, peroxisome, plasma membrane | 41.69 | 46.59 |
| CDY45918 | Canola | cytosol, nucleus, plasma membrane, plastid | 42.18 | 46.58 |
| CDX85316 | Canola | cytosol, nucleus, plasma membrane | 42.18 | 46.53 |
| CDX86335 | Canola | cytosol, nucleus, plasma membrane | 42.08 | 46.42 |
| CDX81049 | Canola | cytosol | 39.04 | 46.32 |
| CDX86059 | Canola | peroxisome, plasma membrane, plastid | 17.8 | 46.29 |
| CDX78290 | Canola | cytosol | 38.74 | 46.14 |
| CDX70035 | Canola | cytosol | 40.02 | 45.94 |
| CDY25278 | Canola | cytosol, peroxisome, plasma membrane | 41.99 | 45.77 |
| CDY63433 | Canola | cytosol | 42.58 | 45.72 |
| CDY11054 | Canola | cytosol, nucleus, plasma membrane | 36.68 | 45.71 |
| CDX92674 | Canola | mitochondrion | 15.63 | 45.69 |
| CDY26109 | Canola | mitochondrion | 26.35 | 45.42 |
| Os08t0453700-00 | Rice | plastid | 42.28 | 45.26 |
| CDX98976 | Canola | cytosol | 40.22 | 45.04 |
| CDY09233 | Canola | cytosol | 35.79 | 41.18 |
| CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 31.66 | 38.15 |
| CDY34341 | Canola | nucleus | 8.55 | 33.59 |
| CDX86058 | Canola | cytosol | 11.31 | 33.24 |
| CDY70539 | Canola | nucleus | 9.54 | 31.7 |
| CDY22645 | Canola | cytosol | 6.0 | 26.99 |
| CDY44266 | Canola | plasma membrane, vacuole | 13.96 | 20.34 |
| CDX88061 | Canola | plasma membrane | 13.18 | 20.24 |
| CDY46972 | Canola | plasma membrane, vacuole | 13.77 | 20.06 |
| CDX90043 | Canola | golgi, plasma membrane | 10.62 | 18.59 |
| CDY69826 | Canola | cytosol, plastid, vacuole | 6.49 | 18.49 |
| CDY38013 | Canola | golgi, plasma membrane | 8.95 | 18.46 |
| CDX68510 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 2.26 | 18.11 |
| CDY22585 | Canola | plasma membrane | 12.78 | 17.93 |
| CDY07230 | Canola | plasma membrane | 12.49 | 17.89 |
| CDY38014 | Canola | plasma membrane | 12.39 | 17.87 |
| CDY12264 | Canola | plasma membrane | 12.29 | 17.71 |
| CDY65711 | Canola | plasma membrane | 12.49 | 17.16 |
| CDX71600 | Canola | plasma membrane | 12.49 | 17.14 |
| CDY38012 | Canola | plasma membrane | 4.62 | 15.51 |
| CDY68445 | Canola | plastid | 7.57 | 14.58 |
Protein Annotations
| KEGG:00480+1.11.1.- | Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | GO:A0A078HTM6 |
| UniProt:A0A078HTM6 | EnsemblPlants:CDY41031 | ProteinID:CDY41031 | ProteinID:CDY41031.1 | ncoils:Coil | InterPro:Cyt_b245_heavy_chain |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom |
| InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0050664 | GO:GO:0055114 | GO:GO:0098869 | EnsemblPlantsGene:GSBRNA2T00072328001 | InterPro:IPR002048 |
| InterPro:IPR017927 | InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 | PFAM:PF08414 |
| PFAM:PF13202 | PRINTS:PR00466 | ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 | PANTHER:PTHR11972 |
| PANTHER:PTHR11972:SF44 | InterPro:Riboflavin_synthase-like_b-brl | SMART:SM00054 | SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 |
| TMHMM:TMhelix | UniParc:UPI0004EE5BC9 | SEG:seg | : | : | : |
Description
BnaC05g14890DBnaC05g14890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTM6]
Coordinates
chrLK032488:+:144974..151055
Molecular Weight (calculated)
115008.0 Da
IEP (calculated)
8.627
GRAVY (calculated)
-0.235
Length
1017 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKLSPLSFST QSSFSHGGDG YDDGVELRPS PSTGGAMLPV FLNGLTRDGD SGSGSSWERE LVEVTLELNG DDSIVVCGMS EATSDSQPRS VNVSGRLTRS
0101: LSTTPTRIRQ TFGRLLRSDS MRPTTSSVSA TETGRDVERQ GAAGTETPIM SARNRRRENA ILQRSTSSAK RALKGLQFIN KTTKGNSCDC NRDGDCDCDC
0201: DCDQMWKKVE KRFESLSKEG LLAREDFGEC VGMKDSKEFA VSVFDALARR RRQKLEKITS DELHDFWLQI SDQSFDARLQ IFFDMVDSNE DGRITSQEIK
0301: EIFKKCFIFQ LSSSNSFLQV KLLRKRGLVL MFLLPNIYFN IIFQADSNED GRITKEEIKE LLMLSASANK LAKLKEQAEE YASLIMEELD PENFGYIELW
0401: QLETLLLQRD TYMDYSRPLS TASVGITTPR RNLIKPRSVV LKCRRKLQCL VLDNWQRIWV LLLWFTVMAI LFVWKFLQYR DKAAFKVMGY CLTTAKGAAE
0501: TLKLNMALVL LPVCRNTLTW LRSTRARAFV PFDDNINFHK IIACAIVIGI LVHAGTHLAC DFPRIINSTP EDFALIASPF NGVKPTFKDL MTGAEGITGI
0601: SMVILTTIAF TLASTHFRRN RVSLPAPLDR LTGFNAFWYT HHLLVVVYIM LIVHGTLLFF ADKWYQKTTW MYISVPLMLY AAERSIRACR SNHYSVKILK
0701: VSMLPGEVLS IIMSKPPGFK YKSGQYIFLQ CPTISRFEWH PFSITSAPGD EQLSIHIRTQ GDWTEELQRV LTVGKDLSTC VIGRSKFSAY GNTDSSQQPK
0801: LLVDGPYGAP AQDYRSYDVL LLIGLGIGAT PFISILKDLL NNSREEQTDN EFSKSDFSWN SNTSSFTTIT PSSTQGGKKK AVKAHFYWVT REPGSVEWFR
0901: GVMEEISDMD CREQIELHNY LTSVYDEGDA RSTLIKMVQA LNHAKHGVDI LSGTRVRTHF ARPNWKEVFS SIARKHPNST VGVFYCGIPT VAKELKKQAQ
1001: EISQKTSTRF EFHKEHF
0101: LSTTPTRIRQ TFGRLLRSDS MRPTTSSVSA TETGRDVERQ GAAGTETPIM SARNRRRENA ILQRSTSSAK RALKGLQFIN KTTKGNSCDC NRDGDCDCDC
0201: DCDQMWKKVE KRFESLSKEG LLAREDFGEC VGMKDSKEFA VSVFDALARR RRQKLEKITS DELHDFWLQI SDQSFDARLQ IFFDMVDSNE DGRITSQEIK
0301: EIFKKCFIFQ LSSSNSFLQV KLLRKRGLVL MFLLPNIYFN IIFQADSNED GRITKEEIKE LLMLSASANK LAKLKEQAEE YASLIMEELD PENFGYIELW
0401: QLETLLLQRD TYMDYSRPLS TASVGITTPR RNLIKPRSVV LKCRRKLQCL VLDNWQRIWV LLLWFTVMAI LFVWKFLQYR DKAAFKVMGY CLTTAKGAAE
0501: TLKLNMALVL LPVCRNTLTW LRSTRARAFV PFDDNINFHK IIACAIVIGI LVHAGTHLAC DFPRIINSTP EDFALIASPF NGVKPTFKDL MTGAEGITGI
0601: SMVILTTIAF TLASTHFRRN RVSLPAPLDR LTGFNAFWYT HHLLVVVYIM LIVHGTLLFF ADKWYQKTTW MYISVPLMLY AAERSIRACR SNHYSVKILK
0701: VSMLPGEVLS IIMSKPPGFK YKSGQYIFLQ CPTISRFEWH PFSITSAPGD EQLSIHIRTQ GDWTEELQRV LTVGKDLSTC VIGRSKFSAY GNTDSSQQPK
0801: LLVDGPYGAP AQDYRSYDVL LLIGLGIGAT PFISILKDLL NNSREEQTDN EFSKSDFSWN SNTSSFTTIT PSSTQGGKKK AVKAHFYWVT REPGSVEWFR
0901: GVMEEISDMD CREQIELHNY LTSVYDEGDA RSTLIKMVQA LNHAKHGVDI LSGTRVRTHF ARPNWKEVFS SIARKHPNST VGVFYCGIPT VAKELKKQAQ
1001: EISQKTSTRF EFHKEHF
001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF
Arabidopsis Description
RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.