CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78290	Canola	cytosol	91.31	91.1
CDX81049	Canola	cytosol	78.99	78.53
CDX70035	Canola	cytosol	68.43	65.8
CDX98976	Canola	cytosol	68.43	64.21
CDY22644	Canola	plasma membrane	40.49	59.9
CDY65632	Canola	nucleus, peroxisome	10.09	59.72
CDX92671	Canola	cytosol	50.59	57.01
CDY38845	Canola	cytosol, peroxisome, plasma membrane	58.57	54.84
CDY35764	Canola	cytosol, nucleus, plasma membrane	57.75	54.73
CDY32647	Canola	cytosol, peroxisome, plasma membrane	58.45	54.73
CDY11053	Canola	cytosol, nucleus, plasma membrane	53.29	54.5
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	58.22	53.85
CDX92674	Canola	mitochondrion	21.71	53.16
VIT_19s0014g02830.t01	Wine grape	cytosol	52.23	52.98
CDX86335	Canola	cytosol, nucleus, plasma membrane	57.28	52.93
CDX85316	Canola	cytosol, nucleus, plasma membrane	57.16	52.82
KRH63901	Soybean	cytosol, nucleus, plasma membrane	57.04	52.37
CDX92675	Canola	cytosol	23.59	52.07
KRH54051	Soybean	cytosol, nucleus, plasma membrane	57.16	51.75
KRH41026	Soybean	mitochondrion	53.87	51.69
CDY11054	Canola	cytosol, nucleus, plasma membrane	49.3	51.47
KRH59706	Soybean	cytosol	53.87	51.11
CDY06348	Canola	cytosol	48.94	51.1
CDY26109	Canola	mitochondrion	33.8	48.81
CDY08237	Canola	cytosol, peroxisome, plasma membrane	29.23	46.8
CDX86059	Canola	peroxisome, plasma membrane, plastid	20.77	45.27
CDY08347	Canola	mitochondrion	48.24	43.54
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	46.95	42.83
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	46.83	42.72
CDY38202	Canola	mitochondrion	45.89	41.46
CDY25278	Canola	cytosol, peroxisome, plasma membrane	44.13	40.3
CDY63433	Canola	cytosol	44.37	39.92
CDY09233	Canola	cytosol	41.31	39.82
CDY41031	Canola	cytosol, peroxisome, plasma membrane	46.71	39.13
CDY26689	Canola	cytosol, peroxisome, plasma membrane	45.66	38.25
CDX99140	Canola	cytosol, peroxisome, plasma membrane	35.68	36.02
CDY34341	Canola	nucleus	10.56	34.75
CDY70539	Canola	nucleus	10.8	30.07
CDY22645	Canola	cytosol	7.86	29.65
CDX86058	Canola	cytosol	11.62	28.61
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	3.05	20.47
CDX88061	Canola	plasma membrane	14.67	18.88
CDY44266	Canola	plasma membrane, vacuole	15.02	18.34
CDY46972	Canola	plasma membrane, vacuole	14.79	18.05
CDY69826	Canola	cytosol, plastid, vacuole	7.39	17.65
CDY07230	Canola	plasma membrane	14.44	17.32
CDY38013	Canola	golgi, plasma membrane	9.98	17.24
CDY38014	Canola	plasma membrane	14.08	17.02
CDX90043	Canola	golgi, plasma membrane	11.27	16.52
CDY22585	Canola	plasma membrane	13.62	16.0
CDY12264	Canola	plasma membrane	13.03	15.72
CDX71600	Canola	plasma membrane	13.38	15.38
CDY65711	Canola	plasma membrane	13.26	15.27
CDY68445	Canola	plastid	8.45	13.64
CDY38012	Canola	plasma membrane	3.76	10.56

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078CWF7
EnsemblPlants:CDX81047	ProteinID:CDX81047	ProteinID:CDX81047.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00134484001
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
UniParc:UPI0004EE6699	SEG:seg	:	:	:	:

Description

BnaC03g03010D

Coordinates

chrLK031823:-:1467226..1472186

Molecular Weight (calculated)

97198.4 Da

IEP (calculated)

9.535

GRAVY (calculated)

-0.224

Length

852 amino acids

Sequence
(BLAST)

001: MQTSGLKNAT IYRRQSLKRT GYEEGHKEHT EITVNTNEES NSLKPCEDPE KSLLRQGHSM KNSVSVLKRI GSTVTTTVAS LASLTPETKP TRRRLKSSTE
101: LALNGLKFIT KADGVAGWPR VEKDFDRLTE TTGGSLDRSK FGECIGIKSK EFAEALFDAL AKRQNITGHV ISKDQLQIFW EKINAPDFDS RLRIFFDMAD
201: TDTDGRLSKD EVREIIALSA SANKLDKIEK QAREYATLIM EELDPYDRGY IMIEALEVLL LQGNTKAVSD LVSQQVEVSQ SRNLWKRLYN GVKYFVLDNW
301: KRLWVMALWI AVMAGLFTWK FMEYRNRPAY QVMGACVCIA KGAGETLKLN MAIILLPVCR NTITLLRTKT KLGVVVPFDD NLNFHKVIAI AISIGVGLHA
401: TSHLACDFPR LIAADEETYK PVEQYFGVQP KSYVQFLKSV EVVTGTVMVI LMTIAFTLAT SWFRRNKLKS LPEPLKKITG FNAFWYTHHL FVTSLVIVYT
501: LLVVHGYYVY LIKTWYRKTT WMYLMIPVVL YLSERLVRSL RSRIESVKIL KIAVLQGEVL LLQMSRPNNF RYKSGQYMYL KCSDVSSLEW HPFSITSAPG
601: DDYLSVHIRD QGDWTNKLRS TFSDVCFPAI PGKMSERRAD LWNGDNLFFP KLVIDGPYGA PSQDYKNFEV VLLVGLGIGA TPMISIIKDI INNLKVNTGD
701: EEEGRGSNRN HNTLFRTKRA YFYWSTKEQG TYEWFKSVMD EVSEADVNNV IELHNYCTSI FEEGDARSAL ITKLQSLNQA KNGRDVVSGT RVMSHFGRPK
801: WRSIYERISV KHPNTRVGVF YCGPATVVKE LHNLATEFSQ RTTKFCFHKE NF

Best Arabidopsis Sequence Match ( AT4G25090.1 )
(BLAST)

001: MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK
101: TDGNAAWTVV EKRYLKITAN TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR LITFFDLMDK DSDGRLTEDE
201: VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS
301: WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH
401: SVSHLACDFP LLIAATPAEY MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK LASFNAFWYT HHLFVIVYIL
501: LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD
601: DYLSVHIKAL GDWTEAIQGV FSEVSKPPPV GDMLNGANSP RFPKIMIDGP YGAPAQDYKK YEVVLLIGLG IGATPMISII KDIINNTETK EQLSQMEKGS
701: PQEQQGNKET FKTRRAYFYW VTKEQGTFDW FKNIMNEIAE RDKSKVIELH NHCTSVYEEG DVRSALIRML QSLNYAKNGL DIVAGTRVMS HFARPNWKNV
801: YKQIAMDHPG ANVGVFYCGA PVLTKELRQL ALEFTHKTST RFSFHKENF

Arabidopsis Description

RBOHGPutative respiratory burst oxidase homolog protein G [Source:UniProtKB/Swiss-Prot;Acc:Q9SW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.