Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, plastid
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol, mitochondrion, peroxisome 51.15 67.8
GSMUA_AchrUn_... Banana cytosol 35.29 60.53
CDY65632 Canola nucleus, peroxisome 20.46 55.56
CDX99140 Canola cytosol, peroxisome, plasma membrane 92.84 43.01
Bra038274.1-P Field mustard cytosol 87.21 39.02
AT3G45810.1 Thale cress cytosol 87.47 37.5
CDY09233 Canola cytosol 82.61 36.54
CDX92674 Canola mitochondrion 31.97 35.92
CDY22644 Canola plasma membrane 49.36 33.51
GSMUA_Achr5P29250_001 Banana cytosol 59.85 32.41
PGSC0003DMT400040179 Potato cytosol 61.64 31.06
Solyc06g075570.1.1 Tomato cytosol 64.19 30.24
PGSC0003DMT400078138 Potato cytosol, nucleus, plastid 64.45 30.22
Solyc11g072800.1.1 Tomato cytosol 61.38 29.41
KRH49079 Soybean cytosol 64.19 29.22
CDY08237 Canola cytosol, peroxisome, plasma membrane 39.64 29.14
VIT_06s0004g03790.t01 Wine grape nucleus 63.43 29.11
Zm00001d009349_P004 Maize plastid 60.87 28.95
KXG32613 Sorghum cytosol, plastid 60.61 28.66
TraesCS1A01G290700.2 Wheat mitochondrion 58.57 28.62
TraesCS1D01G289300.2 Wheat mitochondrion 58.57 28.62
Os05t0465800-01 Rice plasma membrane 59.85 28.57
Zm00001d040974_P002 Maize cytosol, peroxisome, plasma membrane, plastid 61.13 28.38
Os01t0835500-01 Rice cytosol 60.87 28.23
TraesCS3D01G347900.2 Wheat cytosol 59.85 27.63
TraesCS3B01G386600.1 Wheat cytosol 59.85 27.53
TraesCS3A01G354200.2 Wheat cytosol 59.59 27.38
OQU87817 Sorghum cytosol 59.59 27.28
HORVU3Hr1G087210.4 Barley peroxisome, plastid 59.85 27.02
GSMUA_Achr10P... Banana cytosol 58.06 26.9
CDY26109 Canola mitochondrion 40.41 26.78
Zm00001d042961_P002 Maize plasma membrane 59.08 26.16
TraesCS1B01G300000.2 Wheat mitochondrion 58.82 25.84
CDY06348 Canola cytosol 49.1 23.53
CDX92671 Canola cytosol 45.27 23.41
HORVU1Hr1G071340.13 Barley mitochondrion, peroxisome, plastid 59.08 22.85
CDY35764 Canola cytosol, nucleus, plasma membrane 51.41 22.36
CDY38202 Canola mitochondrion 53.45 22.16
CDY08347 Canola mitochondrion 53.2 22.03
CDY45918 Canola cytosol, nucleus, plasma membrane, plastid 51.41 21.82
CDX86335 Canola cytosol, nucleus, plasma membrane 51.41 21.8
CDX85316 Canola cytosol, nucleus, plasma membrane 51.15 21.69
CDX70035 Canola cytosol 48.34 21.33
CDY11053 Canola cytosol, nucleus, plasma membrane 45.27 21.25
CDX78290 Canola cytosol 45.78 20.96
CDX98976 Canola cytosol 48.34 20.82
CDX81047 Canola cytosol 45.27 20.77
CDY38845 Canola cytosol, peroxisome, plasma membrane 48.34 20.77
CDY32647 Canola cytosol, peroxisome, plasma membrane 48.34 20.77
CDX81049 Canola cytosol 44.5 20.3
CDY11054 Canola cytosol, nucleus, plasma membrane 40.92 19.61
CDY25278 Canola cytosol, peroxisome, plasma membrane 46.29 19.4
CDY21676 Canola cytosol, peroxisome, plasma membrane, plastid 46.29 19.38
CDY63433 Canola cytosol 46.8 19.32
CDX81920 Canola cytosol, nucleus, plasma membrane, plastid 45.78 19.16
CDY41031 Canola cytosol, peroxisome, plasma membrane 46.29 17.8
CDY26689 Canola cytosol, peroxisome, plasma membrane 46.29 17.8
CDY69826 Canola cytosol, plastid, vacuole 16.11 17.65
CDY38013 Canola golgi, plasma membrane 19.95 15.82
GSMUA_AchrUn_... Banana cytosol 15.86 14.16
CDX90043 Canola golgi, plasma membrane 19.18 12.91
CDX88061 Canola plasma membrane 19.95 11.78
CDY46972 Canola plasma membrane, vacuole 19.95 11.17
CDY44266 Canola plasma membrane, vacuole 19.69 11.03
CDY65711 Canola plasma membrane 20.46 10.81
CDX71600 Canola plasma membrane 20.46 10.8
CDY68445 Canola plastid 14.58 10.8
CDY12264 Canola plasma membrane 19.18 10.62
CDY22585 Canola plasma membrane 19.44 10.48
CDX68510 Canola extracellular, mitochondrion, plasma membrane, plastid 3.32 10.24
CDY38014 Canola plasma membrane 18.41 10.21
CDY07230 Canola plasma membrane 17.9 9.86
GSMUA_Achr11P... Banana mitochondrion 8.44 6.3
CDY22645 Canola cytosol 3.07 5.31
CDX86058 Canola cytosol 4.09 4.62
CDY70539 Canola nucleus 2.05 2.61
CDX92675 Canola cytosol 1.53 1.55
CDY38012 Canola plasma membrane 0.77 0.99
CDY34341 Canola nucleus 0.0 0.0
Protein Annotations
MapMan:10.1.1Gene3D:2.40.30.10Gene3D:3.40.50.80GO:A0A078DCL2EnsemblPlants:CDX86059ProteinID:CDX86059
ProteinID:CDX86059.1InterPro:Cyt_b245_heavy_chainInterPro:FAD-bd_8InterPro:Fd_Rdtase_FAD-bdInterPro:Fe_red_NAD-bd_6GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00144022001InterPro:IPR017927PFAM:PF08022PFAM:PF08030PRINTS:PR00466
PFscan:PS51384PANTHER:PTHR11972PANTHER:PTHR11972:SF54InterPro:Riboflavin_synthase-like_b-brlSUPFAM:SSF52343SUPFAM:SSF63380
UniParc:UPI0004EF3029SEG:seg::::
Description
BnaC03g55740D
Coordinates
chrLK031844:+:752071..755324
Molecular Weight (calculated)
44397.2 Da
IEP (calculated)
9.002
GRAVY (calculated)
-0.306
Length
391 amino acids
Sequence
(BLAST)
001: MRNSWVHPLP SNSGLILNIF DLDLLYTKAN VPNVNDFCTW MYVAVPMALY ASERLFSRVQ EHNHRVHIIK AIVYSGNVLA LYMTKPQGFK YKSGMYMFVK
101: CPDISKFEWH PFSVTSAPGD EYLSVHIRAL GDWTSELRNR FAETCEPPQA SKPGPNNLVR METRARGENP HIEESQILFP QIFIKGPYGA PAQNYEKFDI
201: LLLIGLGIGA TPFISILKDM LNNLKPGTPK PGQRGEGSVG SESLGGSING GRKFPQRAYF YWVTREQASF EWFKGVMDDI AVYDKNNVIE MHNYLTSMYE
301: AGDARSALIA MVQKLQHAKN GVDIVSESRI RTHFARPNWR KVFSELSSKH ETSRIGVFYC GSPALVRPLN SLCQEFSLES STRFTFHKEN F
Best Arabidopsis Sequence Match ( AT1G64060.1 )
(BLAST)
001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF
Arabidopsis Description
RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.