CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009266.1-P	Field mustard	cytosol	99.21	97.45
CDX98976	Canola	cytosol	98.19	95.81
AT5G07390.1	Thale cress	cytosol	84.09	82.59
CDX81049	Canola	cytosol	69.41	71.76
CDX81047	Canola	cytosol	65.8	68.43
CDX78290	Canola	cytosol	64.22	66.63
CDY65632	Canola	nucleus, peroxisome	10.72	65.97
CDY22644	Canola	plasma membrane	41.65	64.06
CDY38845	Canola	cytosol, peroxisome, plasma membrane	62.87	61.21
CDY32647	Canola	cytosol, peroxisome, plasma membrane	62.64	60.99
CDX92671	Canola	cytosol	50.79	59.52
CDY35764	Canola	cytosol, nucleus, plasma membrane	60.05	59.18
VIT_19s0014g02830.t01	Wine grape	cytosol	55.76	58.81
CDX92674	Canola	mitochondrion	23.02	58.62
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	60.5	58.2
KRH41026	Soybean	mitochondrion	58.13	58.0
CDX85316	Canola	cytosol, nucleus, plasma membrane	60.16	57.81
CDX86335	Canola	cytosol, nucleus, plasma membrane	60.16	57.81
KRH63901	Soybean	cytosol, nucleus, plasma membrane	60.5	57.76
KRH59706	Soybean	cytosol	58.24	57.46
CDY11053	Canola	cytosol, nucleus, plasma membrane	53.84	57.26
KRH54051	Soybean	cytosol, nucleus, plasma membrane	59.82	56.32
CDY06348	Canola	cytosol	50.9	55.27
CDY11054	Canola	cytosol, nucleus, plasma membrane	49.77	54.04
CDY26109	Canola	mitochondrion	35.21	52.88
CDX92675	Canola	cytosol	22.57	51.81
CDY08237	Canola	cytosol, peroxisome, plasma membrane	31.04	51.69
CDX86059	Canola	peroxisome, plasma membrane, plastid	21.33	48.34
CDY08347	Canola	mitochondrion	49.77	46.72
CDY38202	Canola	mitochondrion	47.63	44.75
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	45.71	43.36
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	45.26	42.93
CDY25278	Canola	cytosol, peroxisome, plasma membrane	45.03	42.77
CDY63433	Canola	cytosol	45.37	42.45
CDY09233	Canola	cytosol	40.97	41.06
CDY41031	Canola	cytosol, peroxisome, plasma membrane	45.94	40.02
CDY26689	Canola	cytosol, peroxisome, plasma membrane	44.81	39.04
CDX99140	Canola	cytosol, peroxisome, plasma membrane	35.89	37.68
CDY34341	Canola	nucleus	10.72	36.68
CDY22645	Canola	cytosol	8.35	32.74
CDY70539	Canola	nucleus	11.17	32.35
CDX86058	Canola	cytosol	11.17	28.61
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.93	20.47
CDX88061	Canola	plasma membrane	13.54	18.13
CDY69826	Canola	cytosol, plastid, vacuole	7.22	17.93
CDY44266	Canola	plasma membrane, vacuole	14.11	17.91
CDY38013	Canola	golgi, plasma membrane	9.93	17.85
CDY46972	Canola	plasma membrane, vacuole	13.88	17.62
CDY22585	Canola	plasma membrane	14.11	17.24
CDX90043	Canola	golgi, plasma membrane	11.17	17.04
CDY07230	Canola	plasma membrane	13.54	16.9
CDY12264	Canola	plasma membrane	13.21	16.57
CDY38014	Canola	plasma membrane	13.09	16.45
CDY65711	Canola	plasma membrane	13.32	15.95
CDX71600	Canola	plasma membrane	13.32	15.92
CDY68445	Canola	plastid	7.67	12.88
CDY38012	Canola	plasma membrane	3.95	11.55

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078BZ91
EnsemblPlants:CDX70035	ProteinID:CDX70035	ProteinID:CDX70035.1	ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00136133001	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0004EE3666	SEG:seg	:	:	:

Description

BnaA10g23840D

Coordinates

chrLK031790:-:2804628..2808474

Molecular Weight (calculated)

100906.0 Da

IEP (calculated)

9.723

GRAVY (calculated)

-0.234

Length

886 amino acids

Sequence
(BLAST)

001: MQKLGFEDAR HYYPSGTEKP YSDQSSATIK NTASTSRYHE EDQPYVEISL DIHDDYVSVY GLKSPDHIGG TGSLLRQGRP GKSNSVLKRV ASSFSTELKR
101: VASSSVSSSS ARKPPRPPLA KFRRSKSRAE QALKGLKFIT KTDGVAGWPG VEKRFHEITE NTYGLLHRSR FGECIGINSK DFALALFDAL RRRENVSGDS
201: INKNQLQEFW KQITDQDFDS RLRLFFAMVD RDADGKLNEA EVKEIISLSA SANELENIRR QADEYAALIM ETLDPYHYGY IMIDNLEVLL LQAPMEDIRD
301: GETKNLSKML SHNLRVSQSR NLGERVYRGV KYLLLDNWKR VWVMALWIGV MAGLFAWKFM QYKKRSAYQV MGVCVCAAKG AAETLKLNMA LVLLPVCRNT
401: ITWLRTKTVL SAVVPFDDSL NFHKVIAIGI SVGVAIHATS HLACDFPRLI AANEETYEPM VKYFGVQTKR YMDFVQSVEG VTGIAMVVLM TIAFTLATPW
501: FRRNKLKLPG PLKKITGFNA FWYSHHLFVI VYSLLIVHGY YVYLIKEWSK KTTWMYLMVP VVLYLSERLI RAFRSGIEAV SILKVAVLPG NVLSLQMSRP
601: SNFRYKSGQY MYLNCSEVSS LEWHPFSITS APGDEYLSVH IRVLGDWTKQ LRQLFSEVCK PRLPDENRPN IADPRLLDNI PNFPRILIDG PYGAPAQDYK
701: NFEVVLLVGL GIGATPMISI VKDIINNIKG NGDIEEGRNS NRRQSETFRT KRAYFYWVTR EQGSFDWFKN VMDEVALTDR NKVIELHNYC TSVYEEGDAR
801: SALITMLQSL HHAKHGVDVV SGTRVMSHFA RPNWRSVYKR IAVKHPKTRV GVFYCGAAGL VKELRHLALD FSHNTSTKFC FHKENF

Best Arabidopsis Sequence Match ( AT5G07390.1 )
(BLAST)

001: MMNRSEMQKL GFEHVRYYTE SPYNRGESSA NVATTSNYYG EDEPYVEITL DIHDDSVSVY GLKSPNHRGA GSNYEDQSLL RQGRSGRSNS VLKRLASSVS
101: TGITRVASSV SSSSARKPPR PQLAKLRRSK SRAELALKGL KFITKTDGVT GWPEVEKRFY VMTMTTNGLL HRSRFGECIG MKSTEFALAL FDALARRENV
201: SGDSININEL KEFWKQITDQ DFDSRLRTFF AMVDKDSDGR LNEAEVREII TLSASANELD NIRRQADEYA ALIMEELDPY HYGYIMIENL EILLLQAPMQ
301: DVRDGEGKKL SKMLSQNLMV PQSRNLGARF CRGMKYFLFD NWKRVWVMAL WIGAMAGLFT WKFMEYRKRS AYEVMGVCVC IAKGAAETLK LNMAMILLPV
401: CRNTITWLRT KTKLSAIVPF DDSLNFHKVI AIGISVGVGI HATSHLACDF PRLIAADEDQ YEPMEKYFGP QTKRYLDFVQ SVEGVTGIGM VVLMTIAFTL
501: ATTWFRRNKL NLPGPLKKIT GFNAFWYSHH LFVIVYSLLV VHGFYVYLII EPWYKKTTWM YLMVPVVLYL CERLIRAFRS SVEAVSVLKV AVLPGNVLSL
601: HLSRPSNFRY KSGQYMYLNC SAVSTLEWHP FSITSAPGDD YLSVHIRVLG DWTKQLRSLF SEVCKPRPPD EHRLNRADSK HWDYIPDFPR ILIDGPYGAP
701: AQDYKKFEVV LLVGLGIGAT PMISIVSDII NNLKGVEEGS NRRQSPIHNM VTPPVSPSRK SETFRTKRAY FYWVTREQGS FDWFKNVMDE VTETDRKNVI
801: ELHNYCTSVY EEGDARSALI TMLQSLNHAK HGVDVVSGTR VMSHFARPNW RSVFKRIAVN HPKTRVGVFY CGAAGLVKEL RHLSLDFSHK TSTKFIFHKE
901: NF

Arabidopsis Description

RBOHARespiratory burst oxidase homolog protein A [Source:UniProtKB/Swiss-Prot;Acc:O81209]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.