CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	99.89	99.89
CDY35764	Canola	cytosol, nucleus, plasma membrane	93.27	95.55
CDX86335	Canola	cytosol, nucleus, plasma membrane	90.34	90.24
CDX85316	Canola	cytosol, nucleus, plasma membrane	90.34	90.24
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	89.79	89.79
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	72.53	72.29
VIT_01s0150g00450.t01	Wine grape	cytosol	68.84	68.69
CDY22644	Canola	plasma membrane	41.91	67.01
CDY65632	Canola	nucleus, peroxisome	10.1	64.58
CDY38845	Canola	cytosol, peroxisome, plasma membrane	62.87	63.63
CDY32647	Canola	cytosol, peroxisome, plasma membrane	62.87	63.63
CDX92671	Canola	cytosol	50.71	61.77
CDX70035	Canola	cytosol	58.2	60.5
CDY11053	Canola	cytosol, nucleus, plasma membrane	53.31	58.94
CDX98976	Canola	cytosol	57.87	58.7
CDX81049	Canola	cytosol	54.4	58.46
CDY06348	Canola	cytosol	51.79	58.46
CDX81047	Canola	cytosol	53.85	58.22
CDX92674	Canola	mitochondrion	21.72	57.47
CDX78290	Canola	cytosol	52.99	57.14
CDY11054	Canola	cytosol, nucleus, plasma membrane	48.53	54.78
CDY26109	Canola	mitochondrion	34.31	53.56
CDY08237	Canola	cytosol, peroxisome, plasma membrane	30.84	53.38
CDY08347	Canola	mitochondrion	53.31	52.01
CDX92675	Canola	cytosol	21.72	51.81
CDX86059	Canola	peroxisome, plasma membrane, plastid	21.82	51.41
CDY38202	Canola	mitochondrion	50.81	49.63
CDY63433	Canola	cytosol	47.88	46.57
CDY25278	Canola	cytosol, peroxisome, plasma membrane	47.12	46.52
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	46.58	45.93
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	46.25	45.61
CDY09233	Canola	cytosol	41.26	42.99
CDY41031	Canola	cytosol, peroxisome, plasma membrane	46.58	42.18
CDY26689	Canola	cytosol, peroxisome, plasma membrane	45.17	40.9
CDX99140	Canola	cytosol, peroxisome, plasma membrane	36.26	39.57
CDY34341	Canola	nucleus	10.75	38.22
CDY70539	Canola	nucleus	11.62	34.97
CDY22645	Canola	cytosol	8.03	32.74
CDX86058	Canola	cytosol	11.4	30.35
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.82	20.47
CDX88061	Canola	plasma membrane	13.9	19.34
CDY38013	Canola	golgi, plasma membrane	9.99	18.66
CDY69826	Canola	cytosol, plastid, vacuole	7.17	18.49
CDY46972	Canola	plasma membrane, vacuole	13.9	18.34
CDY44266	Canola	plasma membrane, vacuole	13.79	18.19
CDY22585	Canola	plasma membrane	14.01	17.79
CDX90043	Canola	golgi, plasma membrane	10.97	17.38
CDY38014	Canola	plasma membrane	13.25	17.3
CDY07230	Canola	plasma membrane	13.25	17.18
CDY12264	Canola	plasma membrane	13.14	17.14
CDY65711	Canola	plasma membrane	12.7	15.81
CDX71600	Canola	plasma membrane	12.7	15.79
CDY68445	Canola	plastid	8.14	14.2
CDY38012	Canola	plasma membrane	3.47	10.56

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078I9S8
UniProt:A0A078I9S8	EnsemblPlants:CDY45918	ProteinID:CDY45918	ProteinID:CDY45918.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00082907001	InterPro:IPR002048	InterPro:IPR017927
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466
ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF94	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EF48FC	SEG:seg

Description

BnaAnng07990DBnaAnng07990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9S8]

Coordinates

chrLK032641:+:176932..181757

Molecular Weight (calculated)

104526.0 Da

IEP (calculated)

9.633

GRAVY (calculated)

-0.255

Length

921 amino acids

Sequence
(BLAST)

001: MRRGSSGNDH ELGILRRTNS DTKSDNETIP SNRSAFSGPL GRPKRASKKN ARFAADLPRR SNSISGVGGR EDDEYVEITL DIRDDSVAVH SVQQASPGGP
101: QNLEDPELTL LTKKTLESSL NKSSSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVEERFD KLSLDSNGLL
201: LSSKFWECLG MNKESKDFAD QLFRALAHRN NISGDAITKD QLRFFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGYIMIE NLEMLLLQAP NQSVRIGDSR ILSQMLSQKL KPTTESNPLV RWSEKIKYFV IDNWQRIWIM MLWLAICAGL FTYKFIEYRN
401: NKDAFGVMRY CVCVAKGGAE TLKFNMALIL LPVCRNTITW LRNKTKLGVV VPFDDNLNFH KVIASGIVVG VLLHVVSHLA CDFPRLLAAD EETYEPMVQY
501: FGEQPESYWH FVKEVEGWTG IVMVVLMVIA FTLATPWFRR NKLNLPNFLK KLTGFNAFWY SHHLFIIVYT LLIVHGIKLY LTKIWYKKTT WMYLAVPILL
601: YGSERLIRAF RSSIKPVKIV KVAVYPGNVL SLHMTKPQGF KYKSGQYMFV NCRAVSPFEW HPFSITSAPG DDYVSVHIRT LGDWTRKLKT VFSEVCKPPT
701: AGKSGLLRAD GGDSIAFPKI LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKSRDRDSD IENNSSNGNS KGFRTRKAYF YWVTREQGSF
801: EWFKGIMDEV SELDDEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKRIAVQH PDKRIGVFYC GAPGLTKDLK
901: NLALDFSRKT STKFDFHKEN F

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.