CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032640.1-P	Field mustard	plasma membrane	85.48	35.72
AT1G01580.2	Thale cress	plasma membrane	74.92	28.27
CDY07230	Canola	plasma membrane	58.09	24.79
CDY38014	Canola	plasma membrane	46.53	20.0
CDX90043	Canola	golgi, plasma membrane	38.28	19.97
CDY44266	Canola	plasma membrane, vacuole	35.31	15.33
CDY46972	Canola	plasma membrane, vacuole	33.99	14.76
CDX88061	Canola	plasma membrane	29.04	13.29
CDY65711	Canola	plasma membrane	24.09	9.86
CDX71600	Canola	plasma membrane	23.76	9.72
CDY22585	Canola	plasma membrane	21.12	8.83
CDY12264	Canola	plasma membrane	18.81	8.07
CDX92675	Canola	cytosol	8.58	6.74
CDY22645	Canola	cytosol	4.62	6.19
CDX86058	Canola	cytosol	6.27	5.49
CDY68445	Canola	plastid	8.91	5.11
CDY41031	Canola	cytosol, peroxisome, plasma membrane	15.51	4.62
CDY70539	Canola	nucleus	4.62	4.58
CDY26689	Canola	cytosol, peroxisome, plasma membrane	15.18	4.52
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	13.86	4.5
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	13.86	4.5
CDY25278	Canola	cytosol, peroxisome, plasma membrane	13.53	4.39
CDY38013	Canola	golgi, plasma membrane	6.93	4.26
CDY34341	Canola	nucleus	3.63	4.25
CDY63433	Canola	cytosol	12.87	4.12
CDY32647	Canola	cytosol, peroxisome, plasma membrane	11.88	3.96
CDY38845	Canola	cytosol, peroxisome, plasma membrane	11.88	3.96
CDX70035	Canola	cytosol	11.55	3.95
CDY69826	Canola	cytosol, plastid, vacuole	4.62	3.92
CDX98976	Canola	cytosol	11.55	3.85
CDX81049	Canola	cytosol	10.89	3.85
CDY08347	Canola	mitochondrion	11.88	3.81
CDY06348	Canola	cytosol	10.23	3.8
CDX81047	Canola	cytosol	10.56	3.76
CDX78290	Canola	cytosol	10.56	3.75
CDY11053	Canola	cytosol, nucleus, plasma membrane	9.9	3.6
CDX92671	Canola	cytosol	8.91	3.57
CDY35764	Canola	cytosol, nucleus, plasma membrane	10.56	3.56
CDY09233	Canola	cytosol	10.23	3.51
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	10.56	3.47
CDY11054	Canola	cytosol, nucleus, plasma membrane	9.24	3.43
CDY38202	Canola	mitochondrion	10.56	3.39
CDX85316	Canola	cytosol, nucleus, plasma membrane	10.23	3.36
CDX86335	Canola	cytosol, nucleus, plasma membrane	10.23	3.36
CDY26109	Canola	mitochondrion	5.94	3.05
CDY22644	Canola	plasma membrane	5.61	2.95
CDX99140	Canola	cytosol, peroxisome, plasma membrane	7.59	2.73
CDY08237	Canola	cytosol, peroxisome, plasma membrane	4.62	2.63
CDY65632	Canola	nucleus, peroxisome	0.99	2.08
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	0.66	1.57
CDX86059	Canola	peroxisome, plasma membrane, plastid	0.99	0.77
CDX92674	Canola	mitochondrion	0.66	0.57

Protein Annotations

EnsemblPlants:CDY38012	EnsemblPlantsGene:GSBRNA2T00065068001	GO:A0A078HJK5	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR11972	PANTHER:PTHR11972:SF41	ProteinID:CDY38012	ProteinID:CDY38012.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EE9953	UniProt:A0A078HJK5	MapMan:25.4.2.1	MapMan:25.5.2.1	:	:

Description

BnaCnng08730DBnaCnng08730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJK5]

Coordinates

chrLK032414:+:94994..98736

Molecular Weight (calculated)

34359.1 Da

IEP (calculated)

10.099

GRAVY (calculated)

0.490

Length

303 amino acids

Sequence
(BLAST)

001: MEIVKRNNGG LSPSAGEEFN GMIKGVSKFF MMVVFLGTIM LWIMMPTLTY RNKWLPYMRL KFGASTYFGS SGTTLFMYMF PMVVVACLGC VYLHFKKRKN
101: PHHIVRETNG GVLSALRKPM LVKGPLGIVS ATEIMFLAMF VALLLWSFIT YLRNNFATIT PRSAAAHGES LWQAKLESAA LRIGLIGNIC LAFLFLPVAR
201: GSSLLPAVGL TSESSIKYHI WLGHMVLAIF TVHGLCYVIY WVSMHETSQF LLTVVCLFCC VVSRVYMFLT LVITTPYRHE RSKIHTNTLY HITHFRHEQP
301: FQT

Best Arabidopsis Sequence Match ( AT1G01580.1 )
(BLAST)

001: MEIEKSNNGG SNPSAGEEFK DMIKGVTKFL MMVIFLGTIM LWIMMPTLTY RTKWLPHLRI KFGTSTYFGA TGTTLFMYMF PMMVVACLGC VYLHFKNRKS
101: PHHIDRETKG GVWSKLRKPM LVKGPLGIVS VTEITFLAMF VALLLWCFIT YLRNSFATIT PKSAAAHDES LWQAKLESAA LRLGLIGNIC LAFLFLPVAR
201: GSSLLPAMGL TSESSIKYHI WLGHMVMALF TVHGLCYIIY WASMHEISQM IMWDTKGVSN LAGEIALAAG LVMWATTYPK IRRRFFEVFF YTHYLYIVFM
301: LFFVLHVGIS FSFIALPGFY IFLVDRFLRF LQSRENVRLL AARILPSDTM ELTFSKNSKL VYSPTSIMFV NIPSISKLQW HPFTITSSSK LEPEKLSIVI
401: KKEGKWSTKL HQRLSSSDQI DRLAVSVEGP YGPASADFLR HEALVMVCGG SGITPFISVI RDLIATSQKE TCKIPKITLI CAFKKSSEIS MLDLVLPLSG
501: LETELSSDIN IKIEAFITRD NDAGDEAKAG KIKTLWFKPS LSDQSISSIL GPNSWLWLGA ILASSFLIFM IIIGIITRYY IYPIDHNTNK IYSLTSKTII
601: YILVISVSIM ATCSAAMLWN KKKYGKVESK QVQNVDRPSP TSSPTSSWGY NSLREIESTP QESLVQRTNL HFGERPNLKK LLLDVEGSSV GVLVCGPKKM
701: RQKVAEICSS GLAENLHFES ISFSW

Arabidopsis Description

FRO2ferric reduction oxidase 2 [Source:TAIR;Acc:AT1G01580]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.