Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69826 | Canola | cytosol, plastid, vacuole | 65.52 | 90.48 |
| CDX90043 | Canola | golgi, plasma membrane | 86.0 | 72.98 |
| Bra032640.1-P | Field mustard | plasma membrane | 94.73 | 64.41 |
| AT1G01580.2 | Thale cress | plasma membrane | 83.98 | 51.56 |
| CDY07230 | Canola | plasma membrane | 69.17 | 48.03 |
| CDY38014 | Canola | plasma membrane | 65.31 | 45.67 |
| CDX68510 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 10.34 | 40.16 |
| CDX88061 | Canola | plasma membrane | 50.51 | 37.61 |
| CDY46972 | Canola | plasma membrane, vacuole | 51.52 | 36.39 |
| CDY44266 | Canola | plasma membrane, vacuole | 51.52 | 36.39 |
| CDY68445 | Canola | plastid | 38.13 | 35.61 |
| CDY12264 | Canola | plasma membrane | 33.06 | 23.09 |
| CDY22585 | Canola | plasma membrane | 32.66 | 22.21 |
| CDY65711 | Canola | plasma membrane | 31.24 | 20.81 |
| CDX71600 | Canola | plasma membrane | 30.83 | 20.51 |
| CDY65632 | Canola | nucleus, peroxisome | 5.88 | 20.14 |
| CDX86059 | Canola | peroxisome, plasma membrane, plastid | 15.82 | 19.95 |
| CDX92674 | Canola | mitochondrion | 13.79 | 19.54 |
| CDY22644 | Canola | plasma membrane | 18.86 | 16.15 |
| CDY08237 | Canola | cytosol, peroxisome, plasma membrane | 15.21 | 14.1 |
| CDY26109 | Canola | mitochondrion | 15.42 | 12.88 |
| CDX92671 | Canola | cytosol | 19.27 | 12.57 |
| CDY11053 | Canola | cytosol, nucleus, plasma membrane | 18.86 | 11.16 |
| CDX85316 | Canola | cytosol, nucleus, plasma membrane | 20.08 | 10.74 |
| CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 18.26 | 10.66 |
| CDY06348 | Canola | cytosol | 17.65 | 10.66 |
| CDX86335 | Canola | cytosol, nucleus, plasma membrane | 19.88 | 10.63 |
| CDY11054 | Canola | cytosol, nucleus, plasma membrane | 17.04 | 10.29 |
| CDY38202 | Canola | mitochondrion | 19.68 | 10.29 |
| CDY08347 | Canola | mitochondrion | 19.68 | 10.28 |
| CDY35764 | Canola | cytosol, nucleus, plasma membrane | 18.66 | 10.23 |
| CDY25278 | Canola | cytosol, peroxisome, plasma membrane | 19.07 | 10.07 |
| CDX81049 | Canola | cytosol | 17.44 | 10.04 |
| CDY63433 | Canola | cytosol | 19.27 | 10.03 |
| CDY45918 | Canola | cytosol, nucleus, plasma membrane, plastid | 18.66 | 9.99 |
| CDX81047 | Canola | cytosol | 17.24 | 9.98 |
| CDY21676 | Canola | cytosol, peroxisome, plasma membrane, plastid | 18.86 | 9.96 |
| CDX81920 | Canola | cytosol, nucleus, plasma membrane, plastid | 18.86 | 9.96 |
| CDY09233 | Canola | cytosol | 17.85 | 9.95 |
| CDX70035 | Canola | cytosol | 17.85 | 9.93 |
| CDY38845 | Canola | cytosol, peroxisome, plasma membrane | 17.65 | 9.56 |
| CDY32647 | Canola | cytosol, peroxisome, plasma membrane | 17.65 | 9.56 |
| CDX78290 | Canola | cytosol | 16.43 | 9.48 |
| CDX98976 | Canola | cytosol | 17.44 | 9.47 |
| CDY41031 | Canola | cytosol, peroxisome, plasma membrane | 18.46 | 8.95 |
| CDY26689 | Canola | cytosol, peroxisome, plasma membrane | 18.46 | 8.95 |
| CDY38012 | Canola | plasma membrane | 4.26 | 6.93 |
| CDY22645 | Canola | cytosol | 1.62 | 3.54 |
| CDY70539 | Canola | nucleus | 1.01 | 1.63 |
| CDX86058 | Canola | cytosol | 1.01 | 1.45 |
| CDX92675 | Canola | cytosol | 0.61 | 0.78 |
| CDY34341 | Canola | nucleus | 0.2 | 0.39 |
Protein Annotations
| Gene3D:2.40.30.10 | MapMan:25.4.2.1 | MapMan:25.5.2.1 | Gene3D:3.40.50.80 | GO:A0A078HMH9 | UniProt:A0A078HMH9 |
| EnsemblPlants:CDY38013 | ProteinID:CDY38013 | ProteinID:CDY38013.1 | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom |
| InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00065071001 | InterPro:IPR017927 |
| PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 | PFscan:PS51384 | PANTHER:PTHR11972 | PANTHER:PTHR11972:SF41 |
| InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix | UniParc:UPI0004EE33E8 | SEG:seg |
Description
BnaCnng08740DBnaCnng08740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMH9]
Coordinates
chrLK032414:+:101688..104003
Molecular Weight (calculated)
55469.7 Da
IEP (calculated)
9.554
GRAVY (calculated)
0.150
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKIGSSQGM NVKQLIFMLM WDTKDISNLA GEISLVAGLL MWATAFPAMR RRFFEVFFYT HYLYIVFMLF FVLHVGITFS FIALPGFYIF MVDRFLRFLQ
101: SRDNIRVLSA RILPSHTIEL TFSKNPRLVY SPTSILFVNI PSISKLQWHP FTITSSSKLE PEKLSVVIKS EGKWSTKLYQ RLSSSAQIDH LAVSVEGPYG
201: PASTDFLRHE ALVMVSGGSG VTPFISVIRD MIATSQNQKC KIPKITLICA FKNSSEISML DLVLPLSGLQ TQLSSDINIK IEAFITREKE PRSESPTEKI
301: KTLWFKPSLS DQPISSILGP NSWLWLGGTL SSSFLIFLII IGIITRYYIY PIDHNTNKFY SLTSKNIIYI LVICVSIMAT SSAAMFWNKK NKYGNIENKQ
401: VQNVDVPSPT SSPTSCGNNS LREIESSPQE SLVQCTNLHY GERPNLTKLL LDVEGSSVGV LVCGPKKMRQ NVAEICSSGL AKNLHFESIS FSW
101: SRDNIRVLSA RILPSHTIEL TFSKNPRLVY SPTSILFVNI PSISKLQWHP FTITSSSKLE PEKLSVVIKS EGKWSTKLYQ RLSSSAQIDH LAVSVEGPYG
201: PASTDFLRHE ALVMVSGGSG VTPFISVIRD MIATSQNQKC KIPKITLICA FKNSSEISML DLVLPLSGLQ TQLSSDINIK IEAFITREKE PRSESPTEKI
301: KTLWFKPSLS DQPISSILGP NSWLWLGGTL SSSFLIFLII IGIITRYYIY PIDHNTNKFY SLTSKNIIYI LVICVSIMAT SSAAMFWNKK NKYGNIENKQ
401: VQNVDVPSPT SSPTSCGNNS LREIESSPQE SLVQCTNLHY GERPNLTKLL LDVEGSSVGV LVCGPKKMRQ NVAEICSSGL AKNLHFESIS FSW
001: MEIEKSNNGG SNPSAGEEFK DMIKGVTKFL MMVIFLGTIM LWIMMPTLTY RTKWLPHLRI KFGTSTYFGA TGTTLFMYMF PMMVVACLGC VYLHFKNRKS
101: PHHIDRETKG GVWSKLRKPM LVKGPLGIVS VTEITFLAMF VALLLWCFIT YLRNSFATIT PKSAAAHDES LWQAKLESAA LRLGLIGNIC LAFLFLPVAR
201: GSSLLPAMGL TSESSIKYHI WLGHMVMALF TVHGLCYIIY WASMHEISQM IMWDTKGVSN LAGEIALAAG LVMWATTYPK IRRRFFEVFF YTHYLYIVFM
301: LFFVLHVGIS FSFIALPGFY IFLVDRFLRF LQSRENVRLL AARILPSDTM ELTFSKNSKL VYSPTSIMFV NIPSISKLQW HPFTITSSSK LEPEKLSIVI
401: KKEGKWSTKL HQRLSSSDQI DRLAVSVEGP YGPASADFLR HEALVMVCGG SGITPFISVI RDLIATSQKE TCKIPKITLI CAFKKSSEIS MLDLVLPLSG
501: LETELSSDIN IKIEAFITRD NDAGDEAKAG KIKTLWFKPS LSDQSISSIL GPNSWLWLGA ILASSFLIFM IIIGIITRYY IYPIDHNTNK IYSLTSKTII
601: YILVISVSIM ATCSAAMLWN KKKYGKVESK QVQNVDRPSP TSSPTSSWGY NSLREIESTP QESLVQRTNL HFGERPNLKK LLLDVEGSSV GVLVCGPKKM
701: RQKVAEICSS GLAENLHFES ISFSW
101: PHHIDRETKG GVWSKLRKPM LVKGPLGIVS VTEITFLAMF VALLLWCFIT YLRNSFATIT PKSAAAHDES LWQAKLESAA LRLGLIGNIC LAFLFLPVAR
201: GSSLLPAMGL TSESSIKYHI WLGHMVMALF TVHGLCYIIY WASMHEISQM IMWDTKGVSN LAGEIALAAG LVMWATTYPK IRRRFFEVFF YTHYLYIVFM
301: LFFVLHVGIS FSFIALPGFY IFLVDRFLRF LQSRENVRLL AARILPSDTM ELTFSKNSKL VYSPTSIMFV NIPSISKLQW HPFTITSSSK LEPEKLSIVI
401: KKEGKWSTKL HQRLSSSDQI DRLAVSVEGP YGPASADFLR HEALVMVCGG SGITPFISVI RDLIATSQKE TCKIPKITLI CAFKKSSEIS MLDLVLPLSG
501: LETELSSDIN IKIEAFITRD NDAGDEAKAG KIKTLWFKPS LSDQSISSIL GPNSWLWLGA ILASSFLIFM IIIGIITRYY IYPIDHNTNK IYSLTSKTII
601: YILVISVSIM ATCSAAMLWN KKKYGKVESK QVQNVDRPSP TSSPTSSWGY NSLREIESTP QESLVQRTNL HFGERPNLKK LLLDVEGSSV GVLVCGPKKM
701: RQKVAEICSS GLAENLHFES ISFSW
Arabidopsis Description
FRO2ferric reduction oxidase 2 [Source:TAIR;Acc:AT1G01580]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.