CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013862.1-P	Field mustard	cytosol	97.68	97.68
CDY70539	Canola	nucleus	84.17	71.24
CDX92675	Canola	cytosol	32.05	21.5
CDX86058	Canola	cytosol	23.55	17.63
CDY22645	Canola	cytosol	15.06	17.26
CDY26109	Canola	mitochondrion	30.5	13.39
CDX81049	Canola	cytosol	39.0	11.79
CDY32647	Canola	cytosol, peroxisome, plasma membrane	40.93	11.65
CDY38845	Canola	cytosol, peroxisome, plasma membrane	40.54	11.54
Solyc06g068680.2.1	Tomato	cytosol	35.91	10.85
CDY11053	Canola	cytosol, nucleus, plasma membrane	34.75	10.8
CDX78290	Canola	cytosol	35.52	10.77
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	38.22	10.75
CDX70035	Canola	cytosol	36.68	10.72
CDY08237	Canola	cytosol, peroxisome, plasma membrane	22.01	10.71
CDY35764	Canola	cytosol, nucleus, plasma membrane	37.07	10.68
CDX86335	Canola	cytosol, nucleus, plasma membrane	37.84	10.63
CDX85316	Canola	cytosol, nucleus, plasma membrane	37.84	10.63
CDX81047	Canola	cytosol	34.75	10.56
CDX98976	Canola	cytosol	36.29	10.35
CDY06348	Canola	cytosol	31.27	9.93
CDY11054	Canola	cytosol, nucleus, plasma membrane	30.89	9.8
CDX92671	Canola	cytosol	27.41	9.39
CDY08347	Canola	mitochondrion	33.59	9.22
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	32.05	8.89
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	32.05	8.89
CDY41031	Canola	cytosol, peroxisome, plasma membrane	33.59	8.55
CDY63433	Canola	cytosol	30.12	8.24
CDY38202	Canola	mitochondrion	28.19	7.74
CDY25278	Canola	cytosol, peroxisome, plasma membrane	27.41	7.61
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	6.18	7.51
CDY26689	Canola	cytosol, peroxisome, plasma membrane	29.34	7.47
CDX99140	Canola	cytosol, peroxisome, plasma membrane	23.17	7.11
CDY09233	Canola	cytosol	23.94	7.01
CDY38012	Canola	plasma membrane	4.25	3.63
CDY12264	Canola	plasma membrane	6.56	2.41
CDY22585	Canola	plasma membrane	6.56	2.34
CDY65711	Canola	plasma membrane	6.56	2.3
CDX71600	Canola	plasma membrane	6.56	2.29
CDY44266	Canola	plasma membrane, vacuole	5.79	2.15
CDY46972	Canola	plasma membrane, vacuole	5.79	2.15
CDY38014	Canola	plasma membrane	5.02	1.84
CDX90043	Canola	golgi, plasma membrane	3.86	1.72
CDY07230	Canola	plasma membrane	3.86	1.41
CDX88061	Canola	plasma membrane	3.47	1.36
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	0.39	0.79
CDY68445	Canola	plastid	0.77	0.38
CDY38013	Canola	golgi, plasma membrane	0.39	0.2
CDY65632	Canola	nucleus, peroxisome	0.0	0.0
CDX92674	Canola	mitochondrion	0.0	0.0
CDY69826	Canola	cytosol, plastid, vacuole	0.0	0.0
CDX86059	Canola	peroxisome, plasma membrane, plastid	0.0	0.0
CDY22644	Canola	plasma membrane	0.0	0.0

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078H996	UniProt:A0A078H996	EnsemblPlants:CDY34341
ProteinID:CDY34341	ProteinID:CDY34341.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00056380001	InterPro:IPR002048
InterPro:NADPH_Ox	PFAM:PF08414	PFAM:PF13405	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR11972
PANTHER:PTHR11972:SF64	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EE670B	SEG:seg	:

Description

BnaA01g14440DBnaA01g14440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H996]

Coordinates

chrLK032332:-:376550..377634

Molecular Weight (calculated)

29483.7 Da

IEP (calculated)

4.400

GRAVY (calculated)

-0.570

Length

259 amino acids

Sequence
(BLAST)

001: MERPVSFDVT DYNPEGDDWS NDLIPHRDSM SRPSSPPIHQ NPEMKSPEDA TEYVTITLDI EGNNVVVEEN AEPMVRRQQG SRKKSVVNRR TLDEPSRSKF
101: DSSEALKGLK MFISMTDAGW IAVERRFDKM TAKTGGLLDP LNFGECLGIN SKEFALGLFY TLASQRDISC EGVSKSELLE LWCQINDQCF DSRLRMFFDM
201: ADKDGDGRLS EEEVKQFIRL TASANTQSTT QNMVDKYAAM IMKELDPYDF GYIMVSYIE

Best Arabidopsis Sequence Match ( AT4G25090.1 )
(BLAST)

001: MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK
101: TDGNAAWTVV EKRYLKITAN TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR LITFFDLMDK DSDGRLTEDE
201: VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS
301: WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH
401: SVSHLACDFP LLIAATPAEY MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK LASFNAFWYT HHLFVIVYIL
501: LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD
601: DYLSVHIKAL GDWTEAIQGV FSEVSKPPPV GDMLNGANSP RFPKIMIDGP YGAPAQDYKK YEVVLLIGLG IGATPMISII KDIINNTETK EQLSQMEKGS
701: PQEQQGNKET FKTRRAYFYW VTKEQGTFDW FKNIMNEIAE RDKSKVIELH NHCTSVYEEG DVRSALIRML QSLNYAKNGL DIVAGTRVMS HFARPNWKNV
801: YKQIAMDHPG ANVGVFYCGA PVLTKELRQL ALEFTHKTST RFSFHKENF

Arabidopsis Description

RBOHGPutative respiratory burst oxidase homolog protein G [Source:UniProtKB/Swiss-Prot;Acc:Q9SW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.