CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99140	Canola	cytosol, peroxisome, plasma membrane	80.06	32.82
CDY09233	Canola	cytosol	65.32	25.57
CDY34341	Canola	nucleus	17.63	23.55
CDX92675	Canola	cytosol	24.57	22.02
CDY22645	Canola	cytosol	11.85	18.14
CDY70539	Canola	nucleus	15.9	17.97
CDY26109	Canola	mitochondrion	25.14	14.75
CDY06348	Canola	cytosol	31.21	13.24
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	33.81	12.53
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	33.53	12.42
CDY11053	Canola	cytosol, nucleus, plasma membrane	29.48	12.24
CDY08237	Canola	cytosol, peroxisome, plasma membrane	18.79	12.22
CDY32647	Canola	cytosol, peroxisome, plasma membrane	32.08	12.2
CDY38845	Canola	cytosol, peroxisome, plasma membrane	32.08	12.2
CDY08347	Canola	mitochondrion	33.24	12.18
CDX92671	Canola	cytosol	26.01	11.9
CDY11054	Canola	cytosol, nucleus, plasma membrane	27.75	11.76
CDX81049	Canola	cytosol	28.9	11.67
CDX81047	Canola	cytosol	28.61	11.62
CDX78290	Canola	cytosol	28.61	11.59
CDY35764	Canola	cytosol, nucleus, plasma membrane	30.06	11.57
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	30.35	11.4
CDX86335	Canola	cytosol, nucleus, plasma membrane	30.35	11.39
CDY41031	Canola	cytosol, peroxisome, plasma membrane	33.24	11.31
CDX85316	Canola	cytosol, nucleus, plasma membrane	30.06	11.28
CDX70035	Canola	cytosol	28.61	11.17
CDX98976	Canola	cytosol	28.61	10.9
CDY26689	Canola	cytosol, peroxisome, plasma membrane	30.92	10.52
CDY63433	Canola	cytosol	27.75	10.14
CDY38202	Canola	mitochondrion	27.17	9.97
CDY25278	Canola	cytosol, peroxisome, plasma membrane	26.88	9.97
CDY38012	Canola	plasma membrane	5.49	6.27
CDY22644	Canola	plasma membrane	7.23	4.34
CDX86059	Canola	peroxisome, plasma membrane, plastid	4.62	4.09
CDY44266	Canola	plasma membrane, vacuole	8.09	4.01
CDY22585	Canola	plasma membrane	8.09	3.86
CDY12264	Canola	plasma membrane	7.51	3.68
CDY46972	Canola	plasma membrane, vacuole	7.23	3.58
CDX88061	Canola	plasma membrane	6.65	3.47
CDY38014	Canola	plasma membrane	6.94	3.4
CDY65711	Canola	plasma membrane	6.94	3.24
CDY07230	Canola	plasma membrane	6.65	3.24
CDX71600	Canola	plasma membrane	6.94	3.24
CDX92674	Canola	mitochondrion	3.18	3.16
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	1.16	3.15
CDX90043	Canola	golgi, plasma membrane	4.62	2.75
CDY65632	Canola	nucleus, peroxisome	0.58	1.39
CDY38013	Canola	golgi, plasma membrane	1.45	1.01
CDY69826	Canola	cytosol, plastid, vacuole	0.58	0.56
CDY68445	Canola	plastid	0.29	0.19

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:35.1	GO:A0A078DFJ9	EnsemblPlants:CDX86058	ProteinID:CDX86058
ProteinID:CDX86058.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152	GO:GO:0050664
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00144021001	InterPro:IPR002048	InterPro:NADPH_Ox	PFAM:PF08414	PFAM:PF13405
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR11972	PANTHER:PTHR11972:SF54	SUPFAM:SSF47473	TMHMM:TMhelix
UniParc:UPI0004EEA52D	SEG:seg	:	:	:	:

Description

BnaC03g55730D

Coordinates

chrLK031844:+:750690..751998

Molecular Weight (calculated)

39053.2 Da

IEP (calculated)

9.401

GRAVY (calculated)

-0.340

Length

346 amino acids

Sequence
(BLAST)

001: MKNNRNVDSS KQMLEGVEID PNGENTTNSN NAESSGGGGG ILKNVSRNLG VGSIIRSIKK SGNLGLHNTR KSGNLGPTLP VALEKKQGPQ RVERTTSSAA
101: RGLQSLRFLD RTVTGRERDS WRSIENRFNQ FAVDGRLPKE KFGICIGMGD TLEFAGEVYE ALSRRRQMNT ENGIDKEQLK LFWEDMIKKD LDCRLQIFFD
201: MCDKDGDGKL TEEEVKEVMV LSASANRLAN LKKNAASYAS LIMEELDPDH HGYIEVSILL LTVHKILLAL LTSTFIVLEL GFDQSIRINR IMKPDRPAKT
301: NYVCFRPKTL AFTNFISKSF LLRICYIIFC SGWFWFNPQN KIFILI

Best Arabidopsis Sequence Match ( AT3G45810.1 )
(BLAST)

001: MKNNKKVGTE DSTKWMLESV EIDPKGDSSV KQPESTINSN NPESSGAGGG ILKNVSKNLA VGSIIRSMSV NKWRKSGNLG SPSTRKSGNL GPPLPVSQVK
101: RPGPQRVERT TSSAARGLQS LRFLDRTVTG RERDSWRSIE NRFNQFAVDG RLPKDKFGVC IGMGDTLEFA AKVYEALGRR RQIKTENGID KEQLKLFWED
201: MIKKDLDCRL QIFFDMCDKD GDGKLTEEEV KEVIVLSASA NRLVNLKKNA ASYASLIMEE LDPNEQGYIE MWQLEVLLTG IVSNADSHKV VRKSQQLTRA
301: MIPKRYRTPT SKYVVVTAEL MYEHWKKIWV VTLWLAVNVV LFMWKYEEFT TSPLYNITGR CLCAAKGTAE ILKLNMALIL VPVLRRTLTF LRSTFLNHLI
401: PFDDNINFHK LIAVAIAVIS LLHTALHMLC NYPRLSSCPY NFYSDYAGNL LGAKQPTYLG LMLTPVSVTG VLMIIFMGIS FTLAMHYFRR NIVKLPIPFN
501: RLAGFNSFWY AHHLLVIAYA LLIIHGYILI IEKPWYQKTT WMYVAIPMVL YASERLFSRV QEHNHRVHII KAIVYSGNVL ALYMTKPQGF KYKSGMYMFV
601: KCPDISKFEW HPFSITSAPG DEYLSVHIRA LGDWTSELRN RFAETCEPHQ KSKPSPNDLI RMETRARGAN PHVEESQALF PRIFIKGPYG APAQSYQKFD
701: ILLLIGLGIG ATPFISILKD MLNNLKPGIP KTGQKYEGSV GGESLGGSSV YGGSSVNGGG SVNGGGSVSG GGRKFPQRAY FYWVTREQAS FEWFKGVMDD
801: IAVYDKTNVI EMHNYLTSMY EAGDARSALI AMVQKLQHAK NGVDIVSESR IRTHFARPNW RKVFSELSNK HETSRIGVFY CGSPTLVRPL KSLCQEFSLE
901: SSTRFTFHKE NF

Arabidopsis Description

RBOHJPutative respiratory burst oxidase homolog protein J [Source:UniProtKB/Swiss-Prot;Acc:Q9LZU9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.