CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69826	Canola	cytosol, plastid, vacuole	58.35	94.96
CDY38013	Canola	golgi, plasma membrane	72.98	86.0
Bra033252.1-P	Field mustard	golgi, plasma membrane	99.66	82.71
AT1G01580.2	Thale cress	plasma membrane	84.17	60.9
CDY07230	Canola	plasma membrane	68.5	56.06
CDY38014	Canola	plasma membrane	66.27	54.61
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	9.47	43.31
CDY44266	Canola	plasma membrane, vacuole	49.91	41.55
CDY46972	Canola	plasma membrane, vacuole	49.74	41.4
CDX88061	Canola	plasma membrane	46.47	40.79
CDY38012	Canola	plasma membrane	19.97	38.28
CDY68445	Canola	plastid	31.5	34.66
CDY12264	Canola	plasma membrane	32.19	26.49
CDY22585	Canola	plasma membrane	32.19	25.79
CDY65711	Canola	plasma membrane	30.98	24.32
CDX71600	Canola	plasma membrane	30.46	23.89
CDY65632	Canola	nucleus, peroxisome	4.99	20.14
CDX86059	Canola	peroxisome, plasma membrane, plastid	12.91	19.18
CDX92674	Canola	mitochondrion	11.36	18.97
CDY22644	Canola	plasma membrane	15.49	15.62
CDY08237	Canola	cytosol, peroxisome, plasma membrane	13.94	15.23
CDY26109	Canola	mitochondrion	14.97	14.75
CDX92671	Canola	cytosol	17.21	13.23
CDY11053	Canola	cytosol, nucleus, plasma membrane	17.56	12.24
CDY06348	Canola	cytosol	16.87	12.01
CDX85316	Canola	cytosol, nucleus, plasma membrane	18.59	11.71
CDY25278	Canola	cytosol, peroxisome, plasma membrane	18.76	11.68
CDX86335	Canola	cytosol, nucleus, plasma membrane	18.42	11.61
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	18.59	11.56
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	18.59	11.56
CDY08347	Canola	mitochondrion	18.76	11.55
CDX99140	Canola	cytosol, peroxisome, plasma membrane	16.52	11.37
CDY63433	Canola	cytosol	18.42	11.3
CDY11054	Canola	cytosol, nucleus, plasma membrane	15.83	11.27
CDX81047	Canola	cytosol	16.52	11.27
CDY38202	Canola	mitochondrion	18.24	11.24
CDY35764	Canola	cytosol, nucleus, plasma membrane	17.38	11.23
CDX81049	Canola	cytosol	16.52	11.2
CDX70035	Canola	cytosol	17.04	11.17
CDY38845	Canola	cytosol, peroxisome, plasma membrane	17.38	11.1
CDY32647	Canola	cytosol, peroxisome, plasma membrane	17.38	11.1
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	17.38	10.97
CDX98976	Canola	cytosol	16.7	10.68
CDX78290	Canola	cytosol	15.66	10.66
CDY09233	Canola	cytosol	16.18	10.63
CDY41031	Canola	cytosol, peroxisome, plasma membrane	18.59	10.62
CDY26689	Canola	cytosol, peroxisome, plasma membrane	18.42	10.52
CDY22645	Canola	cytosol	2.93	7.52
CDY70539	Canola	nucleus	2.58	4.9
CDX86058	Canola	cytosol	2.75	4.62
CDY34341	Canola	nucleus	1.72	3.86
CDX92675	Canola	cytosol	2.24	3.37

Protein Annotations

Gene3D:2.40.30.10	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	GO:A0A078DS81	EnsemblPlants:CDX90043
ProteinID:CDX90043	ProteinID:CDX90043.1	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00150545001	InterPro:IPR017927	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF41	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
UniParc:UPI0004EEB606	SEG:seg	:	:	:	:

Description

BnaA10g00390D

Coordinates

chrLK031861:+:1391486..1395782

Molecular Weight (calculated)

66275.8 Da

IEP (calculated)

9.934

GRAVY (calculated)

0.220

Length

581 amino acids

Sequence
(BLAST)

001: MEMTKFFMMV VFLGTIMLWI MMPTRTYKNK WQPYMRLKFG ASTYFGATGT TLFMYMFPMI LVACLGCVYL HFKKRKSPHH IDREIKGGVW SALRKPMLVK
101: GPLGIVSVTE IMFLAMFMLM WDTKDISNLA GEISLVAGLV MWATTYPAVR RRFFEVFFYT HYLYIVFMLF FVFHVGISYT FISFPGFYIF MVDRFLRFLQ
201: SRDNIRLLSA RILPSDTIEL TFSKNPRLVY SPTSILFVNI PSISRLQWHP FTITSSSNLE AEKLSVVIKS EGKWSTKLYQ RLSSSHQIDR LAVSIEGPYG
301: PASTDFFRHE ALVMVSGGSG ITPFISVIRD MIATSQNQKC KIPKITLICA FKNSSEISML HLVLPLSGLQ TELSSDINIK IEAFITREKE PKSEATTEQI
401: KTLWFKPSLS DQPISAILGP NSWLWLGGIL SSSFLIFMII IGIISRYYIY PIDHNTYKIY SWTSESIIYI LVICVSIMAT SSAAMFWNKK KYGNNVETKQ
501: VQNVELPSTT EIESSPQESL VQRTSLHYGE RPNLTKLLLG VEGSSVGVLV CGPKKMRQKV AKICSTGLAK NLHFESISFS W

Best Arabidopsis Sequence Match ( AT1G01580.2 )
(BLAST)

001: MKENKKQDPW GRVTCMEHAT SLLHPIPTQN SLFIYTLSLP LLPSKQANSI LLTKAIVPIL ISLASERERD RNPERKERME IEKSNNGGSN PSAGEEFKDM
101: IKGVTKFLMM VIFLGTIMLW IMMPTLTYRT KWLPHLRIKF GTSTYFGATG TTLFMYMFPM MVVACLGCVY LHFKNRKSPH HIDRETKGGV WSKLRKPMLV
201: KGPLGIVSVT EITFLAMFVA LLLWCFITYL RNSFATITPK SAAAHDESLW QAKLESAALR LGLIGNICLA FLFLPVARGS SLLPAMGLTS ESSIKYHIWL
301: GHMVMALFTV HGLCYIIYWA SMHEISQMIM WDTKGVSNLA GEIALAAGLV MWATTYPKIR RRFFEVFFYT HYLYIVFMLF FVLHVGISFS FIALPGFYIF
401: LVDRFLRFLQ SRENVRLLAA RILPSDTMEL TFSKNSKLVY SPTSIMFVNI PSISKLQWHP FTITSSSKLE PEKLSIVIKK EGKWSTKLHQ RLSSSDQIDR
501: LAVSVEGPYG PASADFLRHE ALVMVCGGSG ITPFISVIRD LIATSQKETC KIPKITLICA FKKSSEISML DLVLPLSGLE TELSSDINIK IEAFITRDND
601: AGDEAKAGKI KTLWFKPSLS DQSISSILGP NSWLWLGAIL ASSFLIFMII IGIITRYYIY PIDHNTNKIY SLTSKTIIYI LVISVSIMAT CSAAMLWNKK
701: KYGKVESKQV QNVDRPSPTS SPTSSWGYNS LREIESTPQE SLVQRTNLHF GERPNLKKLL LDVEGSSVGV LVCGPKKMRQ KVAEICSSGL AENLHFESIS
801: FSW

Arabidopsis Description

FRO2ferric reduction oxidase 2 [Source:TAIR;Acc:AT1G01580]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.