CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane, plastid
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032641.1-P	Field mustard	plasma membrane	90.78	92.22
AT1G01590.1	Thale cress	plasma membrane	78.58	78.69
AT1G23020.2	Thale cress	mitochondrion, plasma membrane	78.87	77.55
CDX90043	Canola	golgi, plasma membrane	54.61	66.27
CDY38013	Canola	golgi, plasma membrane	45.67	65.31
CDY69826	Canola	cytosol, plastid, vacuole	32.34	63.87
CDY07230	Canola	plasma membrane	59.29	58.87
CDY38012	Canola	plasma membrane	20.0	46.53
CDX88061	Canola	plasma membrane	43.26	46.07
CDY46972	Canola	plasma membrane, vacuole	45.39	45.85
CDY44266	Canola	plasma membrane, vacuole	44.96	45.42
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	7.23	40.16
CDY68445	Canola	plastid	25.11	33.52
CDY22585	Canola	plasma membrane	31.77	30.9
CDY12264	Canola	plasma membrane	30.64	30.59
CDY65711	Canola	plasma membrane	29.65	28.24
CDX71600	Canola	plasma membrane	29.5	28.07
CDY65632	Canola	nucleus, peroxisome	3.83	18.75
CDX86059	Canola	peroxisome, plasma membrane, plastid	10.21	18.41
CDY22644	Canola	plasma membrane	15.04	18.4
CDX92674	Canola	mitochondrion	9.08	18.39
CDX92671	Canola	cytosol	16.31	15.21
CDY08237	Canola	cytosol, peroxisome, plasma membrane	11.35	15.04
CDY26109	Canola	mitochondrion	12.2	14.58
CDY06348	Canola	cytosol	16.31	14.09
CDX81047	Canola	cytosol	17.02	14.08
CDX85316	Canola	cytosol, nucleus, plasma membrane	18.16	13.88
CDY11053	Canola	cytosol, nucleus, plasma membrane	16.31	13.81
CDX86335	Canola	cytosol, nucleus, plasma membrane	18.01	13.77
CDX81049	Canola	cytosol	16.74	13.77
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	18.16	13.7
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	18.16	13.7
CDX78290	Canola	cytosol	16.6	13.7
CDY35764	Canola	cytosol, nucleus, plasma membrane	17.3	13.57
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	17.3	13.25
CDX70035	Canola	cytosol	16.45	13.09
CDY08347	Canola	mitochondrion	17.45	13.03
CDY11054	Canola	cytosol, nucleus, plasma membrane	15.04	12.99
CDY25278	Canola	cytosol, peroxisome, plasma membrane	17.16	12.97
CDY32647	Canola	cytosol, peroxisome, plasma membrane	16.6	12.86
CDY38845	Canola	cytosol, peroxisome, plasma membrane	16.6	12.86
CDY63433	Canola	cytosol	17.16	12.78
CDY38202	Canola	mitochondrion	17.02	12.73
CDX98976	Canola	cytosol	16.17	12.56
CDY41031	Canola	cytosol, peroxisome, plasma membrane	17.87	12.39
CDY09233	Canola	cytosol	15.46	12.33
CDY26689	Canola	cytosol, peroxisome, plasma membrane	17.73	12.29
CDX99140	Canola	cytosol, peroxisome, plasma membrane	14.33	11.97
CDX92675	Canola	cytosol	4.26	7.77
CDY22645	Canola	cytosol	2.27	7.08
CDX86058	Canola	cytosol	3.4	6.94
CDY70539	Canola	nucleus	2.7	6.21
CDY34341	Canola	nucleus	1.84	5.02

Protein Annotations

Gene3D:2.40.30.10	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	GO:A0A078HL32	UniProt:A0A078HL32
EnsemblPlants:CDY38014	ProteinID:CDY38014	ProteinID:CDY38014.1	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00065072001	InterPro:IPR017927
PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF41
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EE21AB	SEG:seg

Description

BnaCnng08750DBnaCnng08750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HL32]

Coordinates

chrLK032414:+:105629..108763

Molecular Weight (calculated)

79222.3 Da

IEP (calculated)

9.877

GRAVY (calculated)

0.365

Length

705 amino acids

Sequence
(BLAST)

001: MGLGEMSKDV TMKVTIKLLA MAILGGTMVI WIMMPTSTYK KIWLTSMRAK LGKTTTFGKP GVNLLVYMFP MILLAFLGCI YLHLKKKTSV DQFHSVLERK
101: KRDKFGALRK PLLVKGPLGI VTVTEVMFLT MFMTLLLWSL TNYFYYTFVT ITPQSAAVHG DKIKLKRWEA RLDSISVRLG VAGNICLAFL FYPVARGSSL
201: LAAVGLTSES SIKYHIWLGH LVMTLVTSHG VCYVIYWIST NQVYQMLEWD RTAISNLAGE IALVAGLLMW ATTFSAIRRR IFEVFYYTHH LYIIFMLFFV
301: FHVGISYSLI SLPGFYIFIV DRFLRLIQSH NNVKLVSARV LPCDTVELTF SKNPMLMYSP TSILFVNIPS ISKLQWHPFT ITSSSKLEPE KLSVMIKGQG
401: KWSTKLYQML SSSDQIDRLT VSVEGPYGPT STDFLRYSTL GLHDSLVMVS GGSGITPFIS IIRDLIYLSS TSTCQIPKMT LICAFKHSSD LSMLDLILPI
501: SSEISSFLDI QIKAFVTRET ESTHNKNIIK PLCFKPYVSD NPISPILGPN SWLCLATILS SSFMIFIIII GIITRYHIYP IDQGLNKYTS AYKSIIYLLA
601: ISVSVVATSS IVVFSNKKQY CTKNDQVVEG LSPLVTESSP QQLLSQSTSI HYGERPNLNK LLVGLKGSSV GVLVCGPRKM RQEVAKICSF RSPENLQFES
701: ISFSW

Best Arabidopsis Sequence Match ( AT1G01590.1 )
(BLAST)

001: MGVGEMNKEV IDKVIKFLMM VILMGTIVIW IMMPTSTYKE IWLTSMRAKL GKSIYYGRPG VNLLVYMFPM ILLAFLGCIY LHLKKSTTVN QFNSGVEKKR
101: AKFGALRRPM LVNGPLGIVT VTEVMFLTMF MALLLWSLAN YMYRTFVNVT SESAATDGNN LWQARLDLIA VRIGIVGNIC LAFLFYPVAR GSSLLAAVGL
201: TSESSIKYHI WLGHLVMIIF TSHGLCYFIY WISKNQLVSK MLEWDRTAVS NLAGEIALVA GLMMWVTTYP KIRRRLFEVF FYSHYLYIVF MLFFVFHVGI
301: SHALIPLPGF YIFLVDRFLR FLQSRNNVKL VSARVLPCDT VELNFSKNPM LMYSPTSTMF VNIPSISKLQ WHPFTIISSS KLEPETLSVM IKSQGKWSTK
401: LYDMLSSSSS DQINRLAVSV EGPYGPSSTD FLRHESLVMV SGGSGITPFI SIVRDLFYMS STHKCKIPKM TLICAFKNSS DLSMLDLILP TSGLTTDMAS
501: FVDIQIKAFV TREEKTSVKE STHNRNIIKT RHFKPNVSDQ PISPILGPNS WLCLAAILSS SFMIFIVIIA IITRYHIHPI DQNSEKYTWA YKSLIYLVSI
601: SITVVTTSTA AMLWNKKKYY AKNDQYVDNL SPVIIESSPQ QLISQSTDIH YGERPNLNKL LVGLKGSSVG ILVCGPKKMR QKVAKICSFG SAENLHFESI
701: SFSW

Arabidopsis Description

FRO1Probable ferric reduction oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMM2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.