CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08237	Canola	cytosol, peroxisome, plasma membrane	80.0	88.72
CDY65632	Canola	nucleus, peroxisome	13.22	54.17
CDX92674	Canola	mitochondrion	27.12	45.98
CDX92671	Canola	cytosol	55.42	43.25
CDY11053	Canola	cytosol, nucleus, plasma membrane	59.66	42.26
CDY38845	Canola	cytosol, peroxisome, plasma membrane	64.24	41.65
CDY32647	Canola	cytosol, peroxisome, plasma membrane	64.24	41.65
CDX86059	Canola	peroxisome, plasma membrane, plastid	26.78	40.41
CDY11054	Canola	cytosol, nucleus, plasma membrane	52.03	37.62
VIT_19s0014g02830.t01	Wine grape	cytosol	51.02	35.83
KRH41026	Soybean	mitochondrion	53.39	35.47
CDY06348	Canola	cytosol	48.81	35.29
CDX81049	Canola	cytosol	51.19	35.24
CDX70035	Canola	cytosol	52.88	35.21
KRH59706	Soybean	cytosol	53.39	35.08
CDY35764	Canola	cytosol, nucleus, plasma membrane	53.39	35.04
KRH63901	Soybean	cytosol, nucleus, plasma membrane	54.07	34.38
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	53.56	34.31
CDX98976	Canola	cytosol	52.71	34.25
CDX86335	Canola	cytosol, nucleus, plasma membrane	52.88	33.84
CDX81047	Canola	cytosol	48.81	33.8
KRH54051	Soybean	cytosol, nucleus, plasma membrane	53.9	33.79
CDX85316	Canola	cytosol, nucleus, plasma membrane	52.71	33.73
CDY22644	Canola	plasma membrane	32.71	33.51
CDX92675	Canola	cytosol	21.86	33.42
CDX78290	Canola	cytosol	48.31	33.37
CDY08347	Canola	mitochondrion	49.49	30.93
CDY34341	Canola	nucleus	13.39	30.5
CDY38202	Canola	mitochondrion	46.95	29.37
CDY70539	Canola	nucleus	14.92	28.76
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	45.25	28.59
CDX99140	Canola	cytosol, peroxisome, plasma membrane	40.51	28.32
CDY63433	Canola	cytosol	45.42	28.3
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	44.58	28.16
CDY25278	Canola	cytosol, peroxisome, plasma membrane	44.41	28.08
CDY09233	Canola	cytosol	42.03	28.05
CDY41031	Canola	cytosol, peroxisome, plasma membrane	45.42	26.35
CDY22645	Canola	cytosol	9.66	25.22
CDX86058	Canola	cytosol	14.75	25.14
CDY26689	Canola	cytosol, peroxisome, plasma membrane	43.05	24.98
CDY69826	Canola	cytosol, plastid, vacuole	10.51	17.37
CDY38013	Canola	golgi, plasma membrane	12.88	15.42
CDX90043	Canola	golgi, plasma membrane	14.75	14.97
CDY12264	Canola	plasma membrane	15.08	12.61
CDY07230	Canola	plasma membrane	14.92	12.39
CDY38014	Canola	plasma membrane	14.58	12.2
CDY22585	Canola	plasma membrane	14.92	12.14
CDY44266	Canola	plasma membrane, vacuole	13.9	11.75
CDY46972	Canola	plasma membrane, vacuole	13.9	11.75
CDX88061	Canola	plasma membrane	13.05	11.63
CDY65711	Canola	plasma membrane	13.22	10.54
CDX71600	Canola	plasma membrane	13.22	10.53
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.2	10.24
CDY68445	Canola	plastid	9.15	10.23
CDY38012	Canola	plasma membrane	3.05	5.94

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078GLK1
UniProt:A0A078GLK1	EnsemblPlants:CDY26109	ProteinID:CDY26109	ProteinID:CDY26109.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00034742001	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0004EF1B57
SEG:seg	:	:	:	:	:

Description

BnaC06g10870DBnaC06g10870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLK1]

Coordinates

chrLK032185:-:303572..306722

Molecular Weight (calculated)

67363.0 Da

IEP (calculated)

7.056

GRAVY (calculated)

-0.468

Length

590 amino acids

Sequence
(BLAST)

001: MKKRLASVSN RLTSVSGERE PAARLDRQDS TALTGLRFIS KADGAAGWTA VENRFVEITA TSGGLLPRSK FGECIGMDST DFALELFDAL ARRRLMTQDT
101: IDGDQLREFW EQISAQSFDS RLQTFFDMID SDANGRLTED QVRQIINLSS STNNLPNIQK RTDEYAAMIM EELDPDNIGY IMIESLETLL SHAETRHIRR
201: DSEGSKKLSH MLSLKLNTTR DPKPLKRWYS GLRHFVSDSL QTTSMYFAIP VAFPACEVLI RPFRSSVSTV TIRKVAIYPG NVLTLHLSRP RNFKYQSGQY
301: MFVTCPTIST FEWYGKMHPF SITSAPQDED LSIHIKVVGD WTNALKEVFS EVCAPPPVRD NYRDAYNREE MNPCSFPKIM IDGPYDAPAQ NYKKYNVVLL
401: VGLGIGTAPM MSIIKDIINN VEAKEHSQFS QMEKGTQRHQ QGEKESMKTR KAYFYWVTKD QGSYSWFQNI MNEVTERDTN GVIEVNNYCT SICEEGDVRS
501: VFIRTLQSLN HSKNGVDIVS GTRVMTHFAK PNWKNVYKQI AMDHYGSHVG VFYCGEVSLA EELRQLALEF THKTETRFSF HKENFYPPDK

Best Arabidopsis Sequence Match ( AT4G25090.1 )
(BLAST)

001: MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK
101: TDGNAAWTVV EKRYLKITAN TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR LITFFDLMDK DSDGRLTEDE
201: VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS
301: WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH
401: SVSHLACDFP LLIAATPAEY MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK LASFNAFWYT HHLFVIVYIL
501: LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD
601: DYLSVHIKAL GDWTEAIQGV FSEVSKPPPV GDMLNGANSP RFPKIMIDGP YGAPAQDYKK YEVVLLIGLG IGATPMISII KDIINNTETK EQLSQMEKGS
701: PQEQQGNKET FKTRRAYFYW VTKEQGTFDW FKNIMNEIAE RDKSKVIELH NHCTSVYEEG DVRSALIRML QSLNYAKNGL DIVAGTRVMS HFARPNWKNV
801: YKQIAMDHPG ANVGVFYCGA PVLTKELRQL ALEFTHKTST RFSFHKENF

Arabidopsis Description

RBOHGPutative respiratory burst oxidase homolog protein G [Source:UniProtKB/Swiss-Prot;Acc:Q9SW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.