CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	97.43	97.43
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	98.18	95.52
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	87.69	86.03
CDY41031	Canola	cytosol, peroxisome, plasma membrane	91.01	83.58
CDY26689	Canola	cytosol, peroxisome, plasma membrane	89.72	82.4
Solyc05g025680.1.1	Tomato	plasma membrane	45.5	68.11
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	65.42	66.63
Solyc07g042460.1.1	Tomato	cytosol	61.88	65.61
PGSC0003DMT400035268	Potato	mitochondrion	65.2	64.79
PGSC0003DMT400066027	Potato	peroxisome	31.58	64.41
KRH37549	Soybean	cytosol	62.53	62.93
KRH12608	Soybean	cytosol	62.63	62.5
GSMUA_Achr3P05840_001	Banana	mitochondrion	58.03	60.9
GSMUA_Achr8P23680_001	Banana	mitochondrion	57.82	60.61
TraesCS5B01G212100.1	Wheat	mitochondrion	60.6	57.46
CDY65632	Canola	nucleus, peroxisome	8.78	56.94
TraesCS5D01G222100.1	Wheat	mitochondrion	60.49	56.84
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	60.17	56.83
HORVU5Hr1G062490.8	Barley	plasma membrane	59.85	56.64
KXG35704	Sorghum	mitochondrion	60.92	56.5
Os09t0438000-01	Rice	mitochondrion	60.28	55.91
Zm00001d032079_P001	Maize	mitochondrion	58.24	55.74
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	56.53	55.58
TraesCS6A01G180600.1	Wheat	mitochondrion	56.85	55.54
TraesCS6B01G205000.1	Wheat	mitochondrion	56.85	55.49
KXG25273	Sorghum	mitochondrion	58.89	54.56
CDY22644	Canola	plasma membrane	33.62	54.51
HORVU6Hr1G035970.2	Barley	mitochondrion	54.28	52.87
CDY08347	Canola	mitochondrion	52.57	52.01
CDX92671	Canola	cytosol	40.36	49.87
CDY38202	Canola	mitochondrion	49.68	49.2
Zm00001d020609_P001	Maize	mitochondrion	36.83	48.52
CDY06348	Canola	cytosol	42.08	48.16
CDY11053	Canola	cytosol, nucleus, plasma membrane	42.4	47.54
Solyc05g025690.1.1	Tomato	mitochondrion	12.31	47.52
CDY35764	Canola	cytosol, nucleus, plasma membrane	45.4	47.16
CDX81047	Canola	cytosol	42.83	46.95
CDX85316	Canola	cytosol, nucleus, plasma membrane	46.15	46.75
CDX86335	Canola	cytosol, nucleus, plasma membrane	46.04	46.64
CDX92675	Canola	cytosol	19.27	46.63
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	45.93	46.58
CDX81049	Canola	cytosol	42.51	46.32
CDX86059	Canola	peroxisome, plasma membrane, plastid	19.38	46.29
CDY38845	Canola	cytosol, peroxisome, plasma membrane	45.07	46.26
CDY32647	Canola	cytosol, peroxisome, plasma membrane	45.07	46.26
CDX78290	Canola	cytosol	42.18	46.14
CDY11054	Canola	cytosol, nucleus, plasma membrane	40.15	45.96
CDY08237	Canola	cytosol, peroxisome, plasma membrane	26.12	45.86
CDX70035	Canola	cytosol	43.36	45.71
CDX92674	Canola	mitochondrion	17.02	45.69
CDY26109	Canola	mitochondrion	28.59	45.25
Os08t0453700-00	Rice	plastid	45.61	44.84
CDY25278	Canola	cytosol, peroxisome, plasma membrane	44.75	44.8
CDX98976	Canola	cytosol	43.47	44.71
CDY63433	Canola	cytosol	45.29	44.67
CDY09233	Canola	cytosol	39.19	41.4
CDX99140	Canola	cytosol, peroxisome, plasma membrane	34.69	38.39
CDX86058	Canola	cytosol	12.53	33.81
CDY34341	Canola	nucleus	8.89	32.05
CDY70539	Canola	nucleus	9.96	30.39
CDY22645	Canola	cytosol	6.53	26.99
CDX88061	Canola	plasma membrane	14.35	20.24
CDY44266	Canola	plasma membrane, vacuole	14.99	20.06
CDY46972	Canola	plasma membrane, vacuole	14.78	19.77
CDY69826	Canola	cytosol, plastid, vacuole	7.28	19.05
CDY38013	Canola	golgi, plasma membrane	9.96	18.86
CDX90043	Canola	golgi, plasma membrane	11.56	18.59
CDY38014	Canola	plasma membrane	13.7	18.16
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.46	18.11
CDY22585	Canola	plasma membrane	14.03	18.07
CDY12264	Canola	plasma membrane	13.49	17.85
CDY07230	Canola	plasma membrane	13.38	17.61
CDY65711	Canola	plasma membrane	13.06	16.49
CDX71600	Canola	plasma membrane	13.06	16.46
CDY68445	Canola	plastid	8.24	14.58
CDY38012	Canola	plasma membrane	4.5	13.86

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078G8G3
UniProt:A0A078G8G3	EnsemblPlants:CDY21676	ProteinID:CDY21676	ProteinID:CDY21676.1	ncoils:Coil	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00016164001	InterPro:IPR002048
InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF44
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EDEE07
SEG:seg	:	:	:	:	:

Description

BnaA09g44270DBnaA09g44270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8G3]

Coordinates

chrLK032123:-:120830..125989

Molecular Weight (calculated)

106220.0 Da

IEP (calculated)

8.903

GRAVY (calculated)

-0.230

Length

934 amino acids

Sequence
(BLAST)

001: MKLSPKSFSN FSLSNDDDGV ELRPSPVAGG AMLPIFLSSL SRNGSGSSWK RELVEVTLEL DGDDSIVVCG MSEAASVDTR PRLMRNLSTA PARIRQTLEK
101: LLRSESSDST RTTTSVGRER DIESQGRETP IMSARDKRKE EVKLQRTRSS AQRALQGLQF INKTTKGNSC GCGWDCDCDE MWKKVEKRFE TLSKEGLLAR
201: EYFGECIGMK DSKEFAVSVF DALARRRRQK LEKITKDELH DFWLLISDQS FDARLQIFFD MADSNEDGRI TKEEIKELLM LSASANKLAK LKEQAEEYAS
301: LIMEELDPEN FGYIELWQLE TLLLQRDTYM DYSRPLSTAS VGITTPRRNL IKPRSVVLKC RRKLQCLVLD NWQRIWVLLL WFTVMAILFV WKFLQYRDKA
401: AFKVMGYCLT TAKGAAETLK LNMALVLLPV CRNTLTWLRS TRARAFVPFD DNINFHKIIA CAIVIGILVH AGTHLACDFP RIINSTPEDF ALIASPFNGV
501: KPTFKDLMTG AEGITGISMV ILTTIAFTLA STHFRRNRVS LPAPLDRLTG FNAFWYTHHL LVVVYIMLIV HGTLLFFADK WYQKTTWMYI SVPLMLYAAE
601: RSIRACRSNH YSVKILKVSM LPGEVLSIIM SKPPGFKYKS GQYIFLQCPT ISRFEWHPFS ITSAPGDEQL SIHIRTQGDW TEELQRVLTV GKDLSTCVIG
701: RTKFAAHCNI DLQDRPKLLV DGPYGAPAQD YRSYDVLLLI GLGIGATPFI SILKDLMNNS RDEQILNEFS RSDFSWNSYT SSYTTPTPTS TQGGEKKAVK
801: AHFYWVTREP GSVEWFRGVM EEISDMDYRG QIELHNYLTS VYDEGDARST LIKMVQALNH AKHGVDILSG TRVRTHFARP NWKEVFGSIA RKHPNSTVGV
901: FYCGIPTVAK ELKKQAQEMS QKTTTRFEFH KENF

Best Arabidopsis Sequence Match ( AT1G19230.2 )
(BLAST)

001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF

Arabidopsis Description

RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.