Factsheet for Solyc07g042460.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035268	Potato	mitochondrion	94.44	88.51
Solyc05g025680.1.1	Tomato	plasma membrane	56.64	79.97
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	73.67	70.77
KRH12608	Soybean	cytosol	69.35	65.28
KRH37549	Soybean	cytosol	68.67	65.19
GSMUA_Achr3P05840_001	Banana	mitochondrion	63.34	62.7
GSMUA_Achr8P23680_001	Banana	mitochondrion	63.0	62.29
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	65.61	61.88
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	66.52	61.55
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	64.59	60.92
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	65.49	60.1
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	61.98	57.47
TraesCS5B01G212100.1	Wheat	mitochondrion	63.9	57.16
CDY41031	Canola	cytosol, peroxisome, plasma membrane	65.95	57.13
TraesCS6A01G180600.1	Wheat	mitochondrion	61.98	57.11
Zm00001d032079_P001	Maize	mitochondrion	63.0	56.86
TraesCS6B01G205000.1	Wheat	mitochondrion	61.75	56.84
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	63.79	56.83
HORVU5Hr1G062490.8	Barley	plasma membrane	63.56	56.74
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	66.4	56.52
TraesCS5D01G222100.1	Wheat	mitochondrion	63.68	56.44
Os09t0438000-01	Rice	mitochondrion	64.36	56.31
KXG35704	Sorghum	mitochondrion	63.79	55.81
KXG25273	Sorghum	mitochondrion	63.79	55.75
CDY26689	Canola	cytosol, peroxisome, plasma membrane	64.02	55.46
HORVU6Hr1G035970.2	Barley	mitochondrion	59.36	54.54
Solyc08g081690.2.1	Tomato	cytosol	57.09	52.23
Solyc01g099620.2.1	Tomato	cytosol	48.81	49.71
Solyc06g068680.2.1	Tomato	cytosol	48.24	49.59
Solyc06g075570.1.1	Tomato	cytosol	45.74	48.55
Solyc03g117980.2.1	Tomato	nucleus	50.28	47.23
Solyc11g072800.1.1	Tomato	cytosol	43.7	47.18
Zm00001d020609_P001	Maize	mitochondrion	36.78	45.7
Os08t0453700-00	Rice	plastid	47.33	43.89
Solyc05g025690.1.1	Tomato	mitochondrion	11.92	43.39
Solyc03g112320.2.1	Tomato	plasma membrane	13.17	20.9
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	4.2	18.97
Solyc01g102610.2.1	Tomato	plastid	15.21	18.11
Solyc01g094890.2.1	Tomato	plasma membrane	14.42	17.81
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	13.96	17.11
Solyc06g036220.1.1	Tomato	plasma membrane	7.38	15.48

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	UniProt:K4CEA7
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466
ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF44	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	EnsemblPlantsGene:Solyc07g042460.1	EnsemblPlants:Solyc07g042460.1.1	TMHMM:TMhelix
UniParc:UPI000276BFF0	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:-:55595822..55601926

Molecular Weight (calculated)

100065.0 Da

IEP (calculated)

9.363

GRAVY (calculated)

-0.156

Length

881 amino acids

Sequence
(BLAST)

001: MNEGSERGEE EAPPNGFLAR SASAASKLRR KFSWIRSPSV MSRTSAAASE VSDDNYQLHH TSNTLSAREE MKSKLKLVRS KSTAQRALGG LRFISKTTGE
101: SDTNVLWKKV EARFDALAKD GLLAREDFGE CIGMEDSKEF AVGVFDALIR RRRQKAAKIT KIELHDFWLQ ISDQSFDARL QIFFDMADSN GDGKITRDEV
201: QELIMLSASA NKLSKLKERA AEYASLIMEE LDPECLGYIE LWQLETLLLQ RDNYMTYSRP LSTTSVGWGQ NLGTLNKTKN LVKRASYAFK CLVLDNWQRG
301: WILLLWVMVM AVLFTWKFLQ YRQRAAFQVM GYCLATAKGA AETLKLNMAL ILLPVCRNIL TWLRSTRAKL LLPFDDNINF HKVKCTQTEY IVQHPRIFLT
401: MLFQLQIIAY AIGVGILLHA GNHLACDFPR LINSSPEKFA LIASDFDNVK PTYKSLLTGI EGVTGIAMVI LMAIVFTLAT RTFRRNVLKL PPPFSRLTGF
501: NAFWYSHHLL AVVYVLLLVH GTFLFLVHQW WQKTTWMYIS MPLLLYVAER SLRTCRSEHY AAKILKVSVL PGDVFSLTMS KPNSFKYKSG QYIFLQCPTI
601: SSFEWHPFSI TSAPGDDYLS VHIRMVGDWT NELKRVFTED DSSACEIGRA KFRERGNVDQ RGLPRLLVDG PYGAPAQDYQ NYDVLLLVGL GIGATPFISI
701: LKDLLNNSRS EELDSTTETS ASDDSWTSLA SSSMASTGKK KSLRTKSAHF YWVTREPGSF EWFKGVMNEM AEIDHKGLIE MHNYLTSVYE EGDARSTLIT
801: MVQALNHAKH GVDILSGTQV RTHFARPNWK EVFNKIASKH PYSTVGVFYC GLPALAKELK KLSQELTYKT STRFEFHKEY F

Best Arabidopsis Sequence Match ( AT1G19230.2 )
(BLAST)

001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF

Arabidopsis Description

RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.