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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • plasma membrane 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400066027 Potato peroxisome 61.06 83.19
Solyc07g042460.1.1 Tomato cytosol 79.97 56.64
VIT_11s0016g00540.t01 Wine grape cytosol, peroxisome, plastid 74.52 50.71
KRH37549 Soybean cytosol 71.63 48.17
KRH12608 Soybean cytosol 71.79 47.86
GSMUA_Achr8P23680_001 Banana mitochondrion 66.83 46.8
GSMUA_Achr3P05840_001 Banana mitochondrion 66.67 46.74
CDY21676 Canola cytosol, peroxisome, plasma membrane, plastid 68.11 45.5
CDX81920 Canola cytosol, nucleus, plasma membrane, plastid 67.31 44.97
AT1G19230.2 Thale cress cytosol, peroxisome, plasma membrane 68.59 44.96
Bra031070.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 67.95 44.17
HORVU5Hr1G062490.8 Barley plasma membrane 66.67 42.15
CDY26689 Canola cytosol, peroxisome, plasma membrane 68.59 42.08
CDY41031 Canola cytosol, peroxisome, plasma membrane 68.59 42.08
TraesCS6D01G164500.1 Wheat mitochondrion, plasma membrane 63.94 42.0
TraesCS5B01G212100.1 Wheat mitochondrion 66.19 41.93
Os09t0438000-01 Rice mitochondrion 67.47 41.81
Bra025721.1-P Field mustard cytosol, nucleus, peroxisome 69.23 41.74
TraesCS5D01G222100.1 Wheat mitochondrion 66.35 41.65
TraesCS6A01G180600.1 Wheat mitochondrion 63.78 41.63
TraesCS5A01G211800.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 65.87 41.56
TraesCS6B01G205000.1 Wheat mitochondrion 63.62 41.48
KXG35704 Sorghum mitochondrion 66.83 41.41
Zm00001d032079_P001 Maize mitochondrion 64.26 41.09
KXG25273 Sorghum mitochondrion 65.71 40.67
Solyc08g081690.2.1 Tomato cytosol 61.7 39.98
HORVU6Hr1G035970.2 Barley mitochondrion 59.78 38.89
Solyc06g068680.2.1 Tomato cytosol 52.72 38.39
Solyc06g075570.1.1 Tomato cytosol 50.48 37.95
Solyc01g099620.2.1 Tomato cytosol 52.4 37.8
Solyc11g072800.1.1 Tomato cytosol 48.08 36.76
Solyc03g117980.2.1 Tomato nucleus 53.53 35.61
Os08t0453700-00 Rice plastid 48.56 31.89
Zm00001d020609_P001 Maize mitochondrion 32.05 28.21
Solyc03g112320.2.1 Tomato plasma membrane 16.03 18.02
Solyc01g094890.2.1 Tomato plasma membrane 18.91 16.55
Solyc01g094900.1.1 Tomato cytosol, mitochondrion, plasma membrane, plastid 4.81 15.38
Solyc01g094910.2.1 Tomato peroxisome, plasma membrane, plastid 17.63 15.3
Solyc01g102610.2.1 Tomato plastid 17.95 15.14
Solyc06g036220.1.1 Tomato plasma membrane 9.94 14.76
Solyc05g025690.1.1 Tomato mitochondrion 0.48 1.24
Protein Annotations
MapMan:10.1.1Gene3D:2.40.30.10Gene3D:3.40.50.80InterPro:Cyt_b245_heavy_chainInterPro:FAD-bd_8InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_domInterPro:Fe_red_NAD-bd_6GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0055114InterPro:IPR017927
UniProt:K4BZV6PFAM:PF01794PFAM:PF08022PFAM:PF08030PRINTS:PR00466PFscan:PS51384
PANTHER:PTHR11972PANTHER:PTHR11972:SF44InterPro:Riboflavin_synthase-like_b-brlSUPFAM:SSF52343SUPFAM:SSF63380EnsemblPlantsGene:Solyc05g025680.1
EnsemblPlants:Solyc05g025680.1.1TMHMM:TMhelixUniParc:UPI0002765CD4SEG:seg::
Description
No Description!
Coordinates
chr5:-:35767748..35770495
Molecular Weight (calculated)
70790.1 Da
IEP (calculated)
9.287
GRAVY (calculated)
0.021
Length
624 amino acids
Sequence
(BLAST)
001: MVSASANKLS KLKENAGEYA CLIMEELDPE NVGYIEIWQL ETLLLQRDNY MSHSTPLSTT TVDWSPNIGT SNANNIVKKA SRTVKCLVLE NWHRGLIILL
101: WLLAMIGLFI WKFMQYRKME AFQVMGYCLA TAKGAAETLK FNMALILLPV CRNMLTRLRS TRARILIPFD DNINFHKIIA HAIAVAIILH AANHLACDFP
201: HLVNSSPEKF ALIASDFDKL KPSYISLLTG VEGITGISMV ILMTIAFILA TRRFRRSVPK LPTPLNRLTG FNAFWYSHHL LAFVYILLLL HGTFLFFVHK
301: WYQKTTWMYI SIPLILYIAE RTLRTWRSED YAVKILKVSV LPGDVLSLIM SKPAGFKYKS GQYIFLQCPT ISSFEWHPFS ITSAPGDDYI SVYIRIVGDW
401: TKELKRVFTE IPACLVGRAK FEEQENVDQR GLPRLLVDGP YGAPAQDYQN YDVLLLVGLG IGATPFISIL KDLLNNTRAD ENVDSNTETS ASDDSWTSFG
501: SSSSASSVKK KSQRARSAHF YWVTREPGSL EWFKGVMNEV AEMDHKGQIE MHNYLTSVYE EGDARSTLIT MLQALNHAKH GVDILSGTKV RTHFARPKWT
601: EVFKRIALKH PYSTVGKEFL QSQV
Best Arabidopsis Sequence Match ( AT1G19230.2 )
(BLAST)
001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF
Arabidopsis Description
RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.