CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032079_P001	Maize	mitochondrion	89.78	92.73
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	78.27	83.05
TraesCS6A01G180600.1	Wheat	mitochondrion	78.08	82.32
TraesCS6B01G205000.1	Wheat	mitochondrion	77.78	81.92
HORVU6Hr1G035970.2	Barley	mitochondrion	74.7	78.52
GSMUA_Achr3P05840_001	Banana	mitochondrion	68.95	78.09
GSMUA_Achr8P23680_001	Banana	mitochondrion	68.95	78.0
KXG35704	Sorghum	mitochondrion	77.48	77.56
Os08t0453700-00	Rice	plastid	64.98	68.95
Solyc05g025680.1.1	Tomato	plasma membrane	40.67	65.71
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	59.13	64.99
Solyc07g042460.1.1	Tomato	cytosol	55.75	63.79
PGSC0003DMT400035268	Potato	mitochondrion	59.03	63.3
KRH37549	Soybean	cytosol	57.44	62.39
KRH12608	Soybean	cytosol	57.64	62.07
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	56.25	59.56
PGSC0003DMT400066027	Potato	peroxisome	26.98	59.39
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	54.56	58.89
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	53.97	58.24
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	54.56	57.29
CDY41031	Canola	cytosol, peroxisome, plasma membrane	55.16	54.67
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	56.05	54.59
EES01429	Sorghum	mitochondrion	50.1	53.5
CDY26689	Canola	cytosol, peroxisome, plasma membrane	53.57	53.1
KXG22389	Sorghum	mitochondrion	49.31	51.93
KXG32613	Sorghum	cytosol, plastid	41.77	50.91
OQU87817	Sorghum	cytosol	41.96	49.53
OQU86843	Sorghum	cytosol	44.05	48.05
EES16102	Sorghum	plastid	43.45	47.82
Solyc05g025690.1.1	Tomato	mitochondrion	10.81	45.04
OQU83587	Sorghum	plastid	46.53	43.47
OQU92169	Sorghum	peroxisome, plastid	32.44	39.07
EES10867	Sorghum	plasma membrane	13.29	17.49

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	UniProt:A0A1B6PHW6	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664
GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	EnsemblPlants:KXG25273	ProteinID:KXG25273
ProteinID:KXG25273.1	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF80	InterPro:Riboflavin_synthase-like_b-brl
EnsemblPlantsGene:SORBI_3007G148300	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI00081ABB3A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:57917055..57926738

Molecular Weight (calculated)

112955.0 Da

IEP (calculated)

9.924

GRAVY (calculated)

-0.208

Length

1008 amino acids

Sequence
(BLAST)

0001: MWAPSRGSSS GSGRRTWRRR IADYLADDQT DVSDNESFIT AHSDEYVAAS TSMSAAGGGG MLPAFLADQS DLVEVMLELD EESMVVRSVT PTTAALYGTP
0101: TASSLPGPGA AGPQAHTPDG PRSLSRCSST SSRIRRKFAW LRSPSPSPSL RRPPPAAGAA AATAALSDQQ VVREAALAAR ERRRVQARLL NRSRSGARRA
0201: LKGLRFISRT TTDADGGAAL WRAVEERFNA LATDGLLARD DFGDCIGMVD SKEFAVGIFD ALARRRRQNL ERISKDELYE FWLQISDQSF DARLQIFFDM
0301: VDTNVDGRIT REEVQELIVL SASANKLSKL KEQAEEYASL IMEELDPENL GYIELWQLEA LLLQRDAYMT YSRPMSSGSA AQWSQGLSAG AGAGAGGQQQ
0401: QQQQAQPQPS RWQLQRRRWS PRRAAARARV AAAERWRRAW VVALWCAAMA SLFAWRFVQY RRSAAFRVMG YCLPTAKGAA ETLKLNMALV LLPVCRNTLT
0501: WLRSTWARFF VPFDDSIAFH KMIALAIAVG ICLHAGNHLA CDFPRLIASG PDEYRLVARF FGRDKPSYRG LLAGAEGVTG IVMVTLMAVS FTLATRPFRK
0601: REAEVKPARS ARRWCWPLAH LAGGFNAFWY SHHLLIVVYL LLLVHGWFVF LVDKWYQRTT WMYISVPLVL YVGERTLRAF RSKAYAVKIL KVCLLPGNVL
0701: TITMSKPYGF RYRSGQYIFL QCPTISPFEW HPFSITSAPG DDYISVHIQT RGDWTQELKR IFVENYFTPC VPRRAAFGEL GAVEHKSPPR LLVDGPYGAP
0801: AQDFRNYDVL LLVGLGIGAT PFISILRDLL NNIKLADELM DLAMETSRSE DSANSLSAST ASSSNKRRAY RTSCAHFYWV TREPGSFEWF KGVMNEVAEM
0901: DKKGVIELHN YLTSVYEERD ARTTLLSMVQ ALNHAKHGVD IVSGTRVRTH FARPNWKEVF TRIASKHPNS TVGVFYCGRP TLAKELKKLS LDMSHKTGTR
1001: FDFHKEYF

Best Arabidopsis Sequence Match ( AT1G19230.2 )
(BLAST)

001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF

Arabidopsis Description

RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.