CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023859_P001	Maize	plastid	91.27	92.68
TraesCS5D01G105900.1	Wheat	cytosol	78.17	82.77
TraesCS5B01G099700.1	Wheat	cytosol	78.17	82.02
TraesCS5A01G093600.1	Wheat	cytosol	78.06	81.53
Os12t0541300-01	Rice	plasma membrane	77.62	78.22
HORVU5Hr1G024550.3	Barley	cytosol	70.96	75.67
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	61.79	67.87
CDY65632	Canola	nucleus, peroxisome	10.37	65.97
KRH33894	Soybean	cytosol	57.75	64.12
CDY22644	Canola	plasma membrane	39.85	63.37
PGSC0003DMT400063688	Potato	cytosol	59.61	62.98
Solyc01g099620.2.1	Tomato	cytosol	59.17	62.66
KRG92895	Soybean	extracellular, mitochondrion	59.17	60.97
VIT_14s0060g02320.t01	Wine grape	cytosol	58.95	60.4
KRH68525	Soybean	cytosol	58.3	60.34
KRG96816	Soybean	cytosol	58.3	60.2
OQU86843	Sorghum	cytosol	60.37	59.85
AT1G09090.2	Thale cress	cytosol	53.93	58.6
Bra031658.1-P	Field mustard	cytosol	53.28	57.68
CDY06348	Canola	cytosol	50.87	57.11
OQU83587	Sorghum	plastid	59.17	50.23
EES01429	Sorghum	mitochondrion	50.0	48.52
KXG32613	Sorghum	cytosol, plastid	43.78	48.49
KXG22389	Sorghum	mitochondrion	50.0	47.86
OQU87817	Sorghum	cytosol	43.89	47.07
KXG35704	Sorghum	mitochondrion	48.91	44.49
KXG25273	Sorghum	mitochondrion	47.82	43.45
OQU92169	Sorghum	peroxisome, plastid	33.62	36.8
EES10867	Sorghum	plasma membrane	13.54	16.19

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EntrezGene:8067250	UniProt:C5YPE6
InterPro:Cyt_b245_heavy_chain	EnsemblPlants:EES16102	ProteinID:EES16102	ProteinID:EES16102.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664
GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PFAM:PF13405	PRINTS:PR00466	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF61	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054
EnsemblPlantsGene:SORBI_3008G118700	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0001A8842E
RefSeq:XP_002442264.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:53105842..53110669

Molecular Weight (calculated)

101770.0 Da

IEP (calculated)

8.903

GRAVY (calculated)

-0.132

Length

916 amino acids

Sequence
(BLAST)

001: MSSSSGQQHE TGPPPPTAFK SASTDGKSGS RRSTRFKDED EYVEVTLDVR DDGGGDVAVR AIKDVVLAGG PGVLGDAQDA TALLDPPPTG SAAAAASGGL
101: SSKLRAARAH LGRIASVKRA AVPLSALLRR DRDRDRDRSS RLDRSVVTGA ASALRGLQFL NQAAVTEGWT EVEKRFQRLA VDGFLLRSRF GQCIGMVGSE
201: EFAAQIFDAL ARRRGITAMV LTKDQVREFW EQLSDPGFDA KLQTFFDMVD KNADGQITEE ELKEVLTLTA SANKLSKILE RVDEYTALIM EELDPDNLGY
301: IELANLESLL LQPAPASTST RLVTHSSNNI SQLISQRLAP ARDDSALRRA AMAFLYFMED NWKRVWVMSL WLAINAALFA WKFAAYRRHP TFDVMGYCVC
401: VAKGGAETTK FNMALILLPV CRNTITWLRS RTRLGAAVPF NDNINFHKVV AGGVAVGVAL HAVTHLTCDF PRLLHASAAA YEPMKAYFGQ RRIPDYWWFV
501: RGVEGVTGVI MVVLMAVAYT LAHPWFRRGK LSEGNPLRRL SGFNMFWYSH HLFVIVYVAF VVHGVCLYIN RTWYKQTTWM YLAIPILLYA GERLFRALRS
601: HGLTTVRIEK VALYPGNVIA IHMSKPHGFS YKSGQYIYVN CGEVSPFEWH PFTITSAPGD DYLSMHIRCR GDWTTSFRAL FAQVCRPPAA GQSGLLRADF
701: ASSTAAASAG GGKLPKLLID GPYGAPAQDY RKYDVLLLIG LGIGATPLIS IVKDVLNNIS DDDEEQPSSS SSAAAEFMTR RVYFYWCTRE EGSFEWFRGV
801: MNEVAERDAR GDVVELHNHC TSVYEEGDAR SALLVMLQAL HHAKSGVDVV SGTRVRTHFA RPNWRDVFKR VACNHQGQRV GVFYCGDQKV TPELRRLSQD
901: FSHKTTTKFV FHKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.