Factsheet for TraesCS5D01G105900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G099700.1	Wheat	cytosol	98.15	97.25
TraesCS5A01G093600.1	Wheat	cytosol	97.92	96.58
HORVU5Hr1G024550.3	Barley	cytosol	86.71	87.31
Zm00001d023859_P001	Maize	plastid	83.24	79.82
EES16102	Sorghum	plastid	82.77	78.17
Os12t0541300-01	Rice	plasma membrane	81.97	78.0
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	64.39	66.79
KRH33894	Soybean	cytosol	61.39	64.36
CDY65632	Canola	nucleus, peroxisome	10.64	63.89
CDY22644	Canola	plasma membrane	42.08	63.19
TraesCS4D01G352200.3	Wheat	cytosol	60.58	61.87
Solyc01g099620.2.1	Tomato	cytosol	61.62	61.62
PGSC0003DMT400063688	Potato	cytosol	61.73	61.59
KRG92895	Soybean	extracellular, mitochondrion	62.31	60.63
TraesCS3D01G187300.2	Wheat	cytosol	62.08	59.67
KRH68525	Soybean	cytosol	60.58	59.21
KRG96816	Soybean	cytosol	60.69	59.19
VIT_14s0060g02320.t01	Wine grape	cytosol	60.81	58.84
AT1G09090.2	Thale cress	cytosol	56.3	57.77
Bra031658.1-P	Field mustard	cytosol	55.72	56.97
CDY06348	Canola	cytosol	53.06	56.25
TraesCS4D01G324800.1	Wheat	cytosol	59.42	55.99
TraesCS5D01G306400.1	Wheat	cytosol	58.96	55.62
TraesCS1D01G289300.2	Wheat	mitochondrion	44.51	48.12
TraesCS3D01G279900.1	Wheat	mitochondrion	52.49	47.99
TraesCS3D01G347900.2	Wheat	cytosol	46.82	47.82
TraesCS1D01G350600.1	Wheat	mitochondrion	53.18	47.52
TraesCS1D01G284800.1	Wheat	plastid	53.29	46.15
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	49.48	45.05
TraesCS1D01G285000.1	Wheat	cytosol	47.05	44.82
TraesCS5D01G222100.1	Wheat	mitochondrion	49.83	43.36
TraesCS1D01G284900.1	Wheat	cytosol	51.33	38.28
TraesCS1D01G283600.1	Wheat	cytosol, peroxisome, plasma membrane	34.57	36.91
TraesCS2D01G393700.1	Wheat	plasma membrane	14.68	17.59
TraesCS2D01G311100.1	Wheat	plasma membrane	13.99	16.2

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PFAM:PF13405	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF61	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G105900	EnsemblPlants:TraesCS5D01G105900.1	TIGR:cd00051	TIGR:cd06186
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:119706790..119710532

Molecular Weight (calculated)

97366.0 Da

IEP (calculated)

9.156

GRAVY (calculated)

-0.196

Length

865 amino acids

Sequence
(BLAST)

001: MERNGNAIAG PPPEENKGAD GKSGSRRSTR FKEENEYVEV TLDVGADDAV AVQGVRAAGE TPDAALLPRS GGLSSRLKAE LRRIASAKRG GSDNAPASQR
101: RLDRSMTGAA RALRGLHFLN QSVVTRGSWP EVEKRFDRLA VDGLLLRSRF GQCIGMVGSE EFAAQMYDAL ARRRGIVAQV LTKDELREFW EQLSDPGFDA
201: KLQTFFDMVD KNADGRITEE ELKEVLTLTA SANKLTKILE RVDEYTALIM EELDPDQLGY IELATLESLL LLPPSQAPTS LVAHSSNISQ LISQRLVPAR
301: DANPLRRGVT ATRYFLEDNW KRVWVMALWL SINAGLFAWK FYAYRRHPTF DVMGYCVCVA KGGAETTKFN MALILLPVCR NTITWLRSRT SLGAAVPFND
401: NINFHKVVAG GVAVGVALHG VTHLTCDFPR LLRATDEAYE PMKRYFGQAR VPDYWWFVRG VEGVTGVIMV LLMAVAYTLA HPRFRRSKLG AGNPLKRLSG
501: FNMFWYSHHL FVVVYVALVV HGVCLYINRT WYKQTTWMYL AVPVLLYAGE RLLRALRSHG LTTVRIEKVA VYPGNVIAIH MSKPHGFRYR SGQYIYVNCG
601: EVSPFEWHPF TITSAPGDDY LSMHIRCRGD WTSRFRAIFS QICRPPSAGQ SGLLRADFTS MVEHNANAKF PRLLIDGPYG APAQDYRKYD VLLLIGLGIG
701: ATPLISIVKD VLNNVHRQDG DEGFMTKRVY FYWCTREEGS FEWFRGVMNE VAERDAAGEE SVVELHNHCT SVYEEGDARS AMVVMLQALH HAKSGVDVVS
801: GTRVRTHFAR PCWRDVFKRV ACDHQGQRVG VFYCGDQKLT PELRRLSQDF SHRTTTKFVF HKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.