Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G293900.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.04 | 97.16 |
| TraesCS1A01G284600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 93.21 | 95.33 |
| Zm00001d029861_P002 | Maize | plastid | 67.28 | 72.19 |
| OQU92169 | Sorghum | peroxisome, plastid | 73.7 | 71.33 |
| GSMUA_Achr9P07100_001 | Banana | mitochondrion, plasma membrane | 46.91 | 68.35 |
| KRH56816 | Soybean | plastid | 48.4 | 47.8 |
| KRH03132 | Soybean | plastid | 48.02 | 47.38 |
| TraesCS1D01G289300.2 | Wheat | mitochondrion | 38.02 | 38.5 |
| TraesCS3D01G347900.2 | Wheat | cytosol | 39.88 | 38.13 |
| TraesCS4D01G352200.3 | Wheat | cytosol | 38.15 | 36.48 |
| TraesCS3D01G279900.1 | Wheat | mitochondrion | 41.36 | 35.41 |
| TraesCS4D01G324800.1 | Wheat | cytosol | 39.51 | 34.86 |
| TraesCS5D01G306400.1 | Wheat | cytosol | 39.14 | 34.57 |
| TraesCS5D01G105900.1 | Wheat | cytosol | 36.91 | 34.57 |
| TraesCS3D01G187300.2 | Wheat | cytosol | 38.4 | 34.56 |
| TraesCS1D01G350600.1 | Wheat | mitochondrion | 40.62 | 33.99 |
| TraesCS6D01G164500.1 | Wheat | mitochondrion, plasma membrane | 39.14 | 33.37 |
| TraesCS5D01G222100.1 | Wheat | mitochondrion | 40.0 | 32.6 |
| TraesCS1D01G285000.1 | Wheat | cytosol | 34.2 | 30.51 |
| TraesCS1D01G284800.1 | Wheat | plastid | 36.17 | 29.33 |
| TraesCS1D01G284900.1 | Wheat | cytosol | 36.54 | 25.52 |
| TraesCS2D01G311100.1 | Wheat | plasma membrane | 14.2 | 15.39 |
| TraesCS2D01G393700.1 | Wheat | plasma membrane | 13.46 | 15.1 |
Protein Annotations
| MapMan:10.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | InterPro:Cyt_b245_heavy_chain | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd |
| InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR017927 | PFAM:PF01794 |
| PFAM:PF08022 | PFAM:PF08030 | PRINTS:PR00466 | PFscan:PS51384 | PANTHER:PTHR11972 | PANTHER:PTHR11972:SF127 |
| InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1D01G283600 | EnsemblPlants:TraesCS1D01G283600.1 |
| TIGR:cd06186 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:381965887..381973363
Molecular Weight (calculated)
90470.1 Da
IEP (calculated)
8.010
GRAVY (calculated)
-0.051
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRVPDIQST PPMSQLHDEF LQAPIICSES PVMIQFVSNP SVGGSSDALS ASLSACPSGR SASEVEIEVL FHDADVYVYD DGCCTALPAS ASFLGCDGDS
101: EDVEAGGATA GLLRGPSPGM EFVERDGKGE LKWSEMQGRF GRSSSAHGNT AGENESASSA KEPVLVNQNS YPNRSISRSS SHGIRIALDS CERNSSSNLT
201: EKDIKQAIMF SASLNKLSLS QDEATEYTHL ILEEIQTGQG LAKLSGTRKG TLNDLQPTCC STPIPTKHIQ CMTSAAIVFF RAHWRRIWIV VMWLVACAAL
301: FTWKFMQYRQ RLAFEVMGYC LPTAKGAAET LKFNMAIVLL PVCRNTITWL RRSRSINSVI PFNDNINFHK LVAAGIVIGI ILHGGTHLSC DIPRIAMADK
401: TIFGRTIAGD FGYHQPSYME IVTSIEGTTG IAMVVLMLIA FLLASRPSRR NPGSLPPLVR QMAGFNAFWY SHHLFIVVYV LLIVHSMFLF LAKDVSEKTT
501: WVYVVIPVMI YLGERMFRMV RSMAYESKIL DAMTYPGKVL SLKMTKPPGF RYQSGMYVFV QCPQVSKFEW HPFSLTSAPD DDYLSIHIRS LGDWSYHVYD
601: MFHEALRCSN LDLPKVSIDG PYGAASQDHS KYEIILLIGL GIGATPFISV LKDIANGLDK EGCAANHHSA NGLRKAYFYW VTREQGSFEW FRDIMKEVSA
701: RDSKQGVIEM YNYLTSVYQE GDKRSVLISA IQALHFARHG IDIISKTPVR THFSRPNWPR VFHGLARKHI GERIGVFYCG PDDLGRQLER LCHKMNMRTF
801: TRFVFHKEHF
101: EDVEAGGATA GLLRGPSPGM EFVERDGKGE LKWSEMQGRF GRSSSAHGNT AGENESASSA KEPVLVNQNS YPNRSISRSS SHGIRIALDS CERNSSSNLT
201: EKDIKQAIMF SASLNKLSLS QDEATEYTHL ILEEIQTGQG LAKLSGTRKG TLNDLQPTCC STPIPTKHIQ CMTSAAIVFF RAHWRRIWIV VMWLVACAAL
301: FTWKFMQYRQ RLAFEVMGYC LPTAKGAAET LKFNMAIVLL PVCRNTITWL RRSRSINSVI PFNDNINFHK LVAAGIVIGI ILHGGTHLSC DIPRIAMADK
401: TIFGRTIAGD FGYHQPSYME IVTSIEGTTG IAMVVLMLIA FLLASRPSRR NPGSLPPLVR QMAGFNAFWY SHHLFIVVYV LLIVHSMFLF LAKDVSEKTT
501: WVYVVIPVMI YLGERMFRMV RSMAYESKIL DAMTYPGKVL SLKMTKPPGF RYQSGMYVFV QCPQVSKFEW HPFSLTSAPD DDYLSIHIRS LGDWSYHVYD
601: MFHEALRCSN LDLPKVSIDG PYGAASQDHS KYEIILLIGL GIGATPFISV LKDIANGLDK EGCAANHHSA NGLRKAYFYW VTREQGSFEW FRDIMKEVSA
701: RDSKQGVIEM YNYLTSVYQE GDKRSVLISA IQALHFARHG IDIISKTPVR THFSRPNWPR VFHGLARKHI GERIGVFYCG PDDLGRQLER LCHKMNMRTF
801: TRFVFHKEHF
001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF
Arabidopsis Description
RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.